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IDProjectCategoryView StatusDate SubmittedLast Update
0012982ParaView(No Category)public2012-03-08 10:472012-12-19 07:57
ReporterAntonio LaTorre 
Assigned ToUtkarsh Ayachit 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusclosedResolutionno change required 
PlatformOSOS Version
Product Version3.12 
Target VersionFixed in Version 
Summary0012982: Linking error on MacOS X Lion
DescriptionHi,

I am trying to build Paraview 3.12 from sources and I'm facing a linking problem I am not sure how to solve.
This problem arises while linking ../../bin/libvtkPVVTKExtensions.dylib. This is the output that I get (VERBOSE=1):

Linking CXX shared library ../../bin/libvtkPVVTKExtensions.dylib
cd /usr/local/src/ParaView-3.12.0/build3/ParaViewCore/VTKExtensions && /opt/local/bin/cmake -E cmake_link_script CMakeFiles/vtkPVVTKExtensions.dir/link.txt --verbose=1
/usr/bin/c++ -Wno-deprecated -g -dynamiclib -Wl,-headerpad_max_install_names -o ../../bin/libvtkPVVTKExtensions.dylib -install_name /usr/local/src/ParaView-3.12.0/build3/bin/libvtkPVVTKExtensions.dylib CMakeFiles/vtkPVVTKExtensions.dir/vtkAMRDualClip.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAMRDualContour.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAMRDualGridHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAppendArcLength.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAppendRectilinearGrid.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAttributeDataReductionFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAttributeDataToTableFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkBlockDeliveryPreprocessor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkBSPCutsGenerator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCacheSizeKeeper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCameraInterpolator2.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCameraManipulator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCameraManipulatorGUIHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCellIntegrator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCleanArrays.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCleanUnstructuredGrid.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCleanUnstructuredGridCells.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCompositeAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCompositeDataToUnstructuredGridFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkContextNamedOptions.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCSVExporter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCSVWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkDataSetToRectilinearGrid.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkEnzoReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkEquivalenceSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkExodusFileSeriesReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkExtractHistogram.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkExtractScatterPlot.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFileSequenceParser.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFileSeriesReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFileSeriesWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFlashContour.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFlashReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkGridConnectivity.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkHierarchicalFractal.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkImageCompressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIntegrateAttributes.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIntegrateFlowThroughSurface.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkInteractorStyleTransferFunctionEditor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIntersectFragments.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIsoVolume.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkKdTreeGenerator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkKdTreeManager.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMarkSelectedRows.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceCommBuffer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceIdList.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfacePieceLoading.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfacePieceTransaction.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfacePieceTransactionMatrix.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceProcessLoading.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceProcessRing.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceToProcMap.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMergeArrays.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMergeCompositeDataSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMinMax.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMPICompositeManager.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMultiProcessControllerHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkOrderedCompositeDistributor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkParallelSerialWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPConvertSelection.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPEnSightGoldBinaryReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPEnSightGoldReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPEnSightReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPExtractHistogram.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPGenericEnSightReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPhastaReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPlotEdges.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPointHandleRepresentationSphere.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPolyLineToRectilinearGridFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPPhastaReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPriorityHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizContingencyStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizDescriptiveStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizKMeans.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizMultiCorrelativeStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizPCAStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAMRDualClip.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAMRDualContour.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAnimationCue.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAnimationScene.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVArrayCalculator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVArrowSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAxesActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAxesWidget.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVBooleanKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVBox.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCenterAxesActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVClipClosedSurface.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVClipDataSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCompositeDataPipeline.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCompositeKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVConnectivityFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVContourFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCueManipulator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVDefaultPass.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVDReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVEnSightMasterServerReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVEnSightMasterServerReader2.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVEnSightMasterServerTranslator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExponentialKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExtentTranslator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExtractSelection.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExtractVOI.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVFrustumActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVGenericRenderWindowInteractor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVGeometryFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVGlyphFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVHardwareSelector.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVInteractorStyle.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVJoystickFly.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVJoystickFlyIn.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVJoystickFlyOut.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVKeyFrameAnimationCue.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVKeyFrameCueManipulator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVLinearExtrusionFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVLODActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVLODVolume.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVMergeTables.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVNullSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPlane.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPlotTime.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPostFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPostFilterExecutive.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVRampKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVRecoverGeometryWireframe.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVRenderViewProxy.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVScalarBarActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVSelectionSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVSinusoidKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTextSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballMoveActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballMultiRotate.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballPan.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballRoll.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballRotate.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballZoom.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTransform.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrivialExtentTranslator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrivialProducer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVUpdateSuppressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkQuerySelectionSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkRealtimeAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkRectilinearGridConnectivity.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkReductionFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkScatterPlotMapper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkScatterPlotPainter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSciVizStatistics.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSelectionConverter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSelectionSerializer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSequenceAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSortedTableStreamer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotBlock.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotBlockIterator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotHistoryReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotIStream.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotReaderMap.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotUniReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSquirtCompressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSurfaceVectors.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTableFFT.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTexturePainter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTilesHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTileDisplayHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTimestepsAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTimeToTextConvertor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTrackballPan.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentation.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentation1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentationShapes1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentationShapes2D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentationSimple1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidget.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidget1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidgetShapes1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidgetShapes2D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidgetSimple1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionViewer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUndoElement.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUndoSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUndoStack.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUpdateSuppressorPipeline.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkVolumeRepresentationPreprocessor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkVRMLSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkXMLCollectionReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkXMLPVDWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkZlibImageCompressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIceTCompositeZPassShader_fs.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVVTKExtensionsInstantiator.cxx.o ../../bin/libvtkPVCommon.dylib ../../bin/libvtkPVCommonCS.dylib ../../bin/libvtkXdmfCS.dylib ../../bin/libvtkHybridCS.dylib ../../bin/libvtkParallelCS.dylib ../../bin/libvtkVolumeRenderingCS.dylib ../../bin/libvtkWidgetsCS.dylib ../../bin/libvtkViews.pv3.12.dylib ../../bin/libvtkViewsCS.dylib ../../bin/libvtkCharts.pv3.12.dylib ../../bin/libvtkChartsCS.dylib ../../bin/libKWCommon.dylib ../../bin/libvtksys.pv3.12.dylib ../../bin/libvtkhdf5.1.8.5.dylib -framework OpenGL ../../bin/libQVTK.pv3.12.dylib ../../bin/libvtkPVCommon.dylib ../../bin/libvtkXdmf.dylib ../../bin/libXdmf.dylib ../../bin/libvtkhdf5.1.8.5.dylib ../../bin/libvtkHybridCS.dylib ../../bin/libvtkViewsCS.dylib ../../bin/libvtkInfovisCS.dylib ../../bin/libvtkParallelCS.dylib ../../bin/libvtkCharts.pv3.12.dylib ../../bin/libvtkRenderingCS.dylib ../../bin/libvtkGenericFilteringCS.dylib ../../bin/libvtkGenericFiltering.pv3.12.dylib ../../bin/libvtkGraphicsCS.dylib ../../bin/libvtkIOCS.dylib ../../bin/libvtkImagingCS.dylib ../../bin/libvtkFilteringCS.dylib ../../bin/libvtkCommonCS.dylib ../../bin/libvtkClientServer.dylib ../../bin/libvtkViews.pv3.12.dylib ../../bin/libvtkInfovis.pv3.12.dylib ../../bin/libvtkWidgets.pv3.12.dylib ../../bin/libvtkHybrid.pv3.12.dylib ../../bin/libvtkParallel.pv3.12.dylib ../../bin/libVPIC.pv3.12.dylib ../../bin/libCosmo.pv3.12.dylib ../../bin/libvtkexoIIc.pv3.12.dylib ../../bin/libvtkVolumeRendering.pv3.12.dylib ../../bin/libvtklibxml2.pv3.12.dylib -ldl -lpthread -lm ../../bin/libvtkalglib.pv3.12.dylib /opt/local/lib/libQtWebKit.dylib /opt/local/lib/libQtXmlPatterns.dylib /opt/local/lib/libQtNetwork.dylib ../../bin/libvtkRendering.pv3.12.dylib /opt/local/lib/libQtGui.dylib /opt/local/lib/libQtSql.dylib /opt/local/lib/libQtCore.dylib ../../bin/libvtkIO.pv3.12.dylib ../../bin/libvtkzlib.pv3.12.dylib ../../bin/libvtkDICOMParser.pv3.12.dylib ../../bin/libvtkNetCDF.pv3.12.dylib ../../bin/libvtkNetCDF_cxx.dylib ../../bin/libvtkmetaio.pv3.12.dylib ../../bin/libvtksqlite.pv3.12.dylib ../../bin/libvtkpng.pv3.12.dylib ../../bin/libvtkjpeg.pv3.12.dylib ../../bin/libvtktiff.pv3.12.dylib ../../bin/libvtkexpat.pv3.12.dylib -lobjc ../../bin/libvtkftgl.pv3.12.dylib ../../bin/libvtkfreetype.pv3.12.dylib ../../bin/libvtkGraphics.pv3.12.dylib ../../bin/libvtkverdict.pv3.12.dylib ../../bin/libvtkImaging.pv3.12.dylib ../../bin/libvtkFiltering.pv3.12.dylib ../../bin/libvtkCommon.pv3.12.dylib ../../bin/libvtksys.pv3.12.dylib -lm
Undefined symbols for architecture x86_64:
  "_H5check_version", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadMetaData() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetTime() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetCycle() in vtkFlashReader.cxx.o
  "_H5Fopen", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadMetaData() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetTime() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetCycle() in vtkFlashReader.cxx.o
  "_H5Gopen1", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Gget_num_objs", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Gget_objtype_by_idx", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
  "_H5Gget_objname_by_idx", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Gclose", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Fclose", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::GetTime() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetCycle() in vtkFlashReader.cxx.o
  "_H5Eget_auto1", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
  "_H5Eset_auto1", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      ...
  "_H5Dopen1", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      ...
  "_H5Dget_space", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      ...
  "_H5Sget_simple_extent_dims", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      ...
  "_H5Sget_simple_extent_ndims", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5Dget_type", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDataAttributeNames() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
      ...
  "_H5Tget_native_type", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
      ...
  "_H5open", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_FLOAT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Tequal", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Dread", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_DOUBLE_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_INT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadSimulationParameters(int, bool)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticlesAttribute(char const*, vtkPolyData*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_UINT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5T_NATIVE_SHORT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_USHORT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_UCHAR_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_LONG_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_LLONG_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5Tclose", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      ...
  "_H5Dclose", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      ...
  "_H5close", referenced from:
      vtkFlashReader::~vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::~vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::~vtkFlashReader()in vtkFlashReader.cxx.o
  "_H5Screate_simple", referenced from:
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Sselect_hyperslab", referenced from:
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Sclose", referenced from:
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      ...
  "_H5T_C_S1_g", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
  "_H5Tcopy", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
  "_H5Tset_size", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
  "_H5Tcreate", referenced from:
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadSimulationParameters(int, bool)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticlesAttribute(char const*, vtkPolyData*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticles(vtkPolyData*) in vtkFlashReader.cxx.o
  "_H5Tinsert", referenced from:
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadSimulationParameters(int, bool)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticlesAttribute(char const*, vtkPolyData*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticles(vtkPolyData*) in vtkFlashReader.cxx.o
  "_H5Tget_nmembers", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
  "_H5Tget_member_name", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
  "_H5Tget_member_type", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
  "_H5Tget_size", referenced from:
      vtkFlashReaderInternal::ReadDataAttributeNames() in vtkFlashReader.cxx.o
  "_H5T_STD_I32LE_g", referenced from:
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
ld: symbol(s) not found for architecture x86_64
collect2: ld returned 1 exit status
make[2]: *** [bin/libvtkPVVTKExtensions.dylib] Error 1
make[1]: *** [ParaViewCore/VTKExtensions/CMakeFiles/vtkPVVTKExtensions.dir/all] Error 2
make: *** [all] Error 2

I'm completely new to Paraview, but it seems that it is not finding the symbols related to HDF5
when it tries to link the lib. Should I configure something on the CMakeCache to make it find the
lib with those symbols? Is it a bug of the compilation process?

FYI, I only changed a couple of vars in CMake: BUILD_SHARED_LIBS = ON and VTK_USE_BOOST = ON.
I also tried with VTK_USE_BOOST = Off, but still the same problem.

I'm on MacOS X 10.7 and use Apple's Clang distributed with the latest version of Xcode.

Regards,
Antonio
TagsNo tags attached.
ProjectTBD
Topic Name
Typeincorrect functionality
Attached Files

- Relationships Relation Graph ] Dependency Graph ]

-  Notes
(0028427)
Antonio LaTorre (reporter)
2012-04-03 07:49

Tested on Paraview 3.14 and the bug still remains.

Regards
(0028430)
T. Christopher Madden (reporter)
2012-04-06 10:42

I'm having the same problem. If I run make -k it occurs on several of the build products including the main ParaView application.
(0029282)
Utkarsh Ayachit (administrator)
2012-09-25 11:14

Is this still problem with the latest git-master? We have nightly builds on Lion plus I use Lion with Clang for my development without any issues. If problems persist, please attach your CMakeCache.txt
(0029369)
Pat Marion (reporter)
2012-10-12 12:22

Do you have HDF5 installed from macports? There is a discussion about this on the paraview mailing list. See the email with subject: [Paraview] MacOSX Linking problems

You should uninstall HDF5 from macports, or try the advice I posted in the email.

I believe it could be avoided by changing VTK's cmake scripts. I've seen this on every mac where hdf5 is installed by macports.
(0029370)
Antonio LaTorre (reporter)
2012-10-15 09:02

Thanks Pat. It can be compiled flawlessly with the last version of the Git repo given that the system HDF5 is deactivated (no need to uninstall it, just deactivate it) in MacPorts.

- Issue History
Date Modified Username Field Change
2012-03-08 10:47 Antonio LaTorre New Issue
2012-04-03 07:49 Antonio LaTorre Note Added: 0028427
2012-04-06 10:42 T. Christopher Madden Note Added: 0028430
2012-09-25 11:14 Utkarsh Ayachit Note Added: 0029282
2012-10-12 12:22 Pat Marion Note Added: 0029369
2012-10-15 09:02 Antonio LaTorre Note Added: 0029370
2012-12-19 07:57 Utkarsh Ayachit Status backlog => closed
2012-12-19 07:57 Utkarsh Ayachit Assigned To => Utkarsh Ayachit
2012-12-19 07:57 Utkarsh Ayachit Resolution open => no change required


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