MantisBT - ParaView
View Issue Details
IDProjectCategoryView StatusDate SubmittedLast Update
0012982ParaView(No Category)public2012-03-08 10:472012-12-19 07:57
ReporterAntonio LaTorre 
Assigned ToUtkarsh Ayachit 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusclosedResolutionno change required 
PlatformOSOS Version
Product Version3.12 
Target VersionFixed in Version 
ProjectTBD
Topic Name
Typeincorrect functionality
Summary0012982: Linking error on MacOS X Lion
DescriptionHi,

I am trying to build Paraview 3.12 from sources and I'm facing a linking problem I am not sure how to solve.
This problem arises while linking ../../bin/libvtkPVVTKExtensions.dylib. This is the output that I get (VERBOSE=1):

Linking CXX shared library ../../bin/libvtkPVVTKExtensions.dylib
cd /usr/local/src/ParaView-3.12.0/build3/ParaViewCore/VTKExtensions && /opt/local/bin/cmake -E cmake_link_script CMakeFiles/vtkPVVTKExtensions.dir/link.txt --verbose=1
/usr/bin/c++ -Wno-deprecated -g -dynamiclib -Wl,-headerpad_max_install_names -o ../../bin/libvtkPVVTKExtensions.dylib -install_name /usr/local/src/ParaView-3.12.0/build3/bin/libvtkPVVTKExtensions.dylib CMakeFiles/vtkPVVTKExtensions.dir/vtkAMRDualClip.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAMRDualContour.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAMRDualGridHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAppendArcLength.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAppendRectilinearGrid.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAttributeDataReductionFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkAttributeDataToTableFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkBlockDeliveryPreprocessor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkBSPCutsGenerator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCacheSizeKeeper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCameraInterpolator2.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCameraManipulator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCameraManipulatorGUIHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCellIntegrator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCleanArrays.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCleanUnstructuredGrid.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCleanUnstructuredGridCells.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCompositeAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCompositeDataToUnstructuredGridFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkContextNamedOptions.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCSVExporter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkCSVWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkDataSetToRectilinearGrid.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkEnzoReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkEquivalenceSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkExodusFileSeriesReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkExtractHistogram.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkExtractScatterPlot.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFileSequenceParser.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFileSeriesReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFileSeriesWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFlashContour.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkFlashReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkGridConnectivity.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkHierarchicalFractal.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkImageCompressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIntegrateAttributes.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIntegrateFlowThroughSurface.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkInteractorStyleTransferFunctionEditor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIntersectFragments.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIsoVolume.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkKdTreeGenerator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkKdTreeManager.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMarkSelectedRows.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceCommBuffer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceIdList.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfacePieceLoading.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfacePieceTransaction.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfacePieceTransactionMatrix.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceProcessLoading.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceProcessRing.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMaterialInterfaceToProcMap.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMergeArrays.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMergeCompositeDataSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMinMax.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMPICompositeManager.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkMultiProcessControllerHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkOrderedCompositeDistributor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkParallelSerialWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPConvertSelection.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPEnSightGoldBinaryReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPEnSightGoldReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPEnSightReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPExtractHistogram.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPGenericEnSightReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPhastaReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPlotEdges.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPointHandleRepresentationSphere.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPolyLineToRectilinearGridFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPPhastaReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPriorityHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizContingencyStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizDescriptiveStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizKMeans.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizMultiCorrelativeStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPSciVizPCAStats.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAMRDualClip.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAMRDualContour.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAnimationCue.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAnimationScene.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVArrayCalculator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVArrowSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAxesActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVAxesWidget.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVBooleanKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVBox.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCenterAxesActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVClipClosedSurface.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVClipDataSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCompositeDataPipeline.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCompositeKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVConnectivityFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVContourFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVCueManipulator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVDefaultPass.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVDReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVEnSightMasterServerReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVEnSightMasterServerReader2.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVEnSightMasterServerTranslator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExponentialKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExtentTranslator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExtractSelection.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVExtractVOI.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVFrustumActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVGenericRenderWindowInteractor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVGeometryFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVGlyphFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVHardwareSelector.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVInteractorStyle.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVJoystickFly.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVJoystickFlyIn.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVJoystickFlyOut.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVKeyFrameAnimationCue.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVKeyFrameCueManipulator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVLinearExtrusionFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVLODActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVLODVolume.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVMergeTables.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVNullSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPlane.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPlotTime.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPostFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVPostFilterExecutive.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVRampKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVRecoverGeometryWireframe.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVRenderViewProxy.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVScalarBarActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVSelectionSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVSinusoidKeyFrame.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTextSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballMoveActor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballMultiRotate.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballPan.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballRoll.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballRotate.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrackballZoom.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTransform.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrivialExtentTranslator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVTrivialProducer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVUpdateSuppressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkQuerySelectionSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkRealtimeAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkRectilinearGridConnectivity.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkReductionFilter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkScatterPlotMapper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkScatterPlotPainter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSciVizStatistics.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSelectionConverter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSelectionSerializer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSequenceAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSortedTableStreamer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotBlock.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotBlockIterator.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotHistoryReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotIStream.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotReaderMap.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSpyPlotUniReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSquirtCompressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkSurfaceVectors.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTableFFT.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTexturePainter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTilesHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTileDisplayHelper.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTimestepsAnimationPlayer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTimeToTextConvertor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTrackballPan.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentation.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentation1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentationShapes1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentationShapes2D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorRepresentationSimple1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidget.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidget1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidgetShapes1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidgetShapes2D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionEditorWidgetSimple1D.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkTransferFunctionViewer.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUndoElement.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUndoSet.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUndoStack.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkUpdateSuppressorPipeline.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkVolumeRepresentationPreprocessor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkVRMLSource.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkXMLCollectionReader.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkXMLPVDWriter.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkZlibImageCompressor.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkIceTCompositeZPassShader_fs.cxx.o CMakeFiles/vtkPVVTKExtensions.dir/vtkPVVTKExtensionsInstantiator.cxx.o ../../bin/libvtkPVCommon.dylib ../../bin/libvtkPVCommonCS.dylib ../../bin/libvtkXdmfCS.dylib ../../bin/libvtkHybridCS.dylib ../../bin/libvtkParallelCS.dylib ../../bin/libvtkVolumeRenderingCS.dylib ../../bin/libvtkWidgetsCS.dylib ../../bin/libvtkViews.pv3.12.dylib ../../bin/libvtkViewsCS.dylib ../../bin/libvtkCharts.pv3.12.dylib ../../bin/libvtkChartsCS.dylib ../../bin/libKWCommon.dylib ../../bin/libvtksys.pv3.12.dylib ../../bin/libvtkhdf5.1.8.5.dylib -framework OpenGL ../../bin/libQVTK.pv3.12.dylib ../../bin/libvtkPVCommon.dylib ../../bin/libvtkXdmf.dylib ../../bin/libXdmf.dylib ../../bin/libvtkhdf5.1.8.5.dylib ../../bin/libvtkHybridCS.dylib ../../bin/libvtkViewsCS.dylib ../../bin/libvtkInfovisCS.dylib ../../bin/libvtkParallelCS.dylib ../../bin/libvtkCharts.pv3.12.dylib ../../bin/libvtkRenderingCS.dylib ../../bin/libvtkGenericFilteringCS.dylib ../../bin/libvtkGenericFiltering.pv3.12.dylib ../../bin/libvtkGraphicsCS.dylib ../../bin/libvtkIOCS.dylib ../../bin/libvtkImagingCS.dylib ../../bin/libvtkFilteringCS.dylib ../../bin/libvtkCommonCS.dylib ../../bin/libvtkClientServer.dylib ../../bin/libvtkViews.pv3.12.dylib ../../bin/libvtkInfovis.pv3.12.dylib ../../bin/libvtkWidgets.pv3.12.dylib ../../bin/libvtkHybrid.pv3.12.dylib ../../bin/libvtkParallel.pv3.12.dylib ../../bin/libVPIC.pv3.12.dylib ../../bin/libCosmo.pv3.12.dylib ../../bin/libvtkexoIIc.pv3.12.dylib ../../bin/libvtkVolumeRendering.pv3.12.dylib ../../bin/libvtklibxml2.pv3.12.dylib -ldl -lpthread -lm ../../bin/libvtkalglib.pv3.12.dylib /opt/local/lib/libQtWebKit.dylib /opt/local/lib/libQtXmlPatterns.dylib /opt/local/lib/libQtNetwork.dylib ../../bin/libvtkRendering.pv3.12.dylib /opt/local/lib/libQtGui.dylib /opt/local/lib/libQtSql.dylib /opt/local/lib/libQtCore.dylib ../../bin/libvtkIO.pv3.12.dylib ../../bin/libvtkzlib.pv3.12.dylib ../../bin/libvtkDICOMParser.pv3.12.dylib ../../bin/libvtkNetCDF.pv3.12.dylib ../../bin/libvtkNetCDF_cxx.dylib ../../bin/libvtkmetaio.pv3.12.dylib ../../bin/libvtksqlite.pv3.12.dylib ../../bin/libvtkpng.pv3.12.dylib ../../bin/libvtkjpeg.pv3.12.dylib ../../bin/libvtktiff.pv3.12.dylib ../../bin/libvtkexpat.pv3.12.dylib -lobjc ../../bin/libvtkftgl.pv3.12.dylib ../../bin/libvtkfreetype.pv3.12.dylib ../../bin/libvtkGraphics.pv3.12.dylib ../../bin/libvtkverdict.pv3.12.dylib ../../bin/libvtkImaging.pv3.12.dylib ../../bin/libvtkFiltering.pv3.12.dylib ../../bin/libvtkCommon.pv3.12.dylib ../../bin/libvtksys.pv3.12.dylib -lm
Undefined symbols for architecture x86_64:
  "_H5check_version", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadMetaData() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetTime() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetCycle() in vtkFlashReader.cxx.o
  "_H5Fopen", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadMetaData() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetTime() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetCycle() in vtkFlashReader.cxx.o
  "_H5Gopen1", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Gget_num_objs", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Gget_objtype_by_idx", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
  "_H5Gget_objname_by_idx", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Gclose", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
  "_H5Fclose", referenced from:
      vtkEnzoReaderInternal::GetAttributeNames() in vtkEnzoReader.cxx.o
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::GetTime() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::GetCycle() in vtkFlashReader.cxx.o
  "_H5Eget_auto1", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
  "_H5Eset_auto1", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      ...
  "_H5Dopen1", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      ...
  "_H5Dget_space", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      ...
  "_H5Sget_simple_extent_dims", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      ...
  "_H5Sget_simple_extent_ndims", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5Dget_type", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDataAttributeNames() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
      ...
  "_H5Tget_native_type", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadProcessorIds() in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
      ...
  "_H5open", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_FLOAT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Tequal", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Dread", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_DOUBLE_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_INT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadSimulationParameters(int, bool)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticlesAttribute(char const*, vtkPolyData*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
      ...
  "_H5T_NATIVE_UINT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5T_NATIVE_SHORT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_USHORT_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_UCHAR_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_LONG_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5T_NATIVE_LLONG_g", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
  "_H5Tclose", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      ...
  "_H5Dclose", referenced from:
      vtkEnzoReader::LoadAttribute(char const*, int)in vtkEnzoReader.cxx.o
      vtkEnzoReader::GetParticles(int, vtkPolyData*, int, int)in vtkEnzoReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      ...
  "_H5close", referenced from:
      vtkFlashReader::~vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::~vtkFlashReader()in vtkFlashReader.cxx.o
      vtkFlashReader::~vtkFlashReader()in vtkFlashReader.cxx.o
  "_H5Screate_simple", referenced from:
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Sselect_hyperslab", referenced from:
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetBlockAttribute(char const*, int, vtkDataSet*)in vtkFlashReader.cxx.o
  "_H5Sclose", referenced from:
      vtkFlashReaderInternal::ReadParticlesComponent(int, char const*, double*)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadRefinementLevels() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockStructures() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockCenters() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockBounds() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadBlockTypes() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      ...
  "_H5T_C_S1_g", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
  "_H5Tcopy", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
  "_H5Tset_size", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributesFLASH3() in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
  "_H5Tcreate", referenced from:
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadSimulationParameters(int, bool)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticlesAttribute(char const*, vtkPolyData*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticles(vtkPolyData*) in vtkFlashReader.cxx.o
  "_H5Tinsert", referenced from:
      vtkFlashReaderInternal::ReadIntegerScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadDoubleScalars(int) in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadSimulationParameters(int, bool)in vtkFlashReader.cxx.o
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticlesAttribute(char const*, vtkPolyData*)in vtkFlashReader.cxx.o
      vtkFlashReader::GetParticles(vtkPolyData*) in vtkFlashReader.cxx.o
  "_H5Tget_nmembers", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
  "_H5Tget_member_name", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
  "_H5Tget_member_type", referenced from:
      vtkFlashReaderInternal::ReadParticleAttributes() in vtkFlashReader.cxx.o
  "_H5Tget_size", referenced from:
      vtkFlashReaderInternal::ReadDataAttributeNames() in vtkFlashReader.cxx.o
  "_H5T_STD_I32LE_g", referenced from:
      vtkFlashReaderInternal::ReadVersionInformation(int) in vtkFlashReader.cxx.o
ld: symbol(s) not found for architecture x86_64
collect2: ld returned 1 exit status
make[2]: *** [bin/libvtkPVVTKExtensions.dylib] Error 1
make[1]: *** [ParaViewCore/VTKExtensions/CMakeFiles/vtkPVVTKExtensions.dir/all] Error 2
make: *** [all] Error 2

I'm completely new to Paraview, but it seems that it is not finding the symbols related to HDF5
when it tries to link the lib. Should I configure something on the CMakeCache to make it find the
lib with those symbols? Is it a bug of the compilation process?

FYI, I only changed a couple of vars in CMake: BUILD_SHARED_LIBS = ON and VTK_USE_BOOST = ON.
I also tried with VTK_USE_BOOST = Off, but still the same problem.

I'm on MacOS X 10.7 and use Apple's Clang distributed with the latest version of Xcode.

Regards,
Antonio
Steps To Reproduce
Additional Information
TagsNo tags attached.
Relationships
Attached Files
Issue History
Date ModifiedUsernameFieldChange
2012-03-08 10:47Antonio LaTorreNew Issue
2012-04-03 07:49Antonio LaTorreNote Added: 0028427
2012-04-06 10:42T. Christopher MaddenNote Added: 0028430
2012-09-25 11:14Utkarsh AyachitNote Added: 0029282
2012-10-12 12:22Pat MarionNote Added: 0029369
2012-10-15 09:02Antonio LaTorreNote Added: 0029370
2012-12-19 07:57Utkarsh AyachitStatusbacklog => closed
2012-12-19 07:57Utkarsh AyachitAssigned To => Utkarsh Ayachit
2012-12-19 07:57Utkarsh AyachitResolutionopen => no change required

Notes
(0028427)
Antonio LaTorre   
2012-04-03 07:49   
Tested on Paraview 3.14 and the bug still remains.

Regards
(0028430)
T. Christopher Madden   
2012-04-06 10:42   
I'm having the same problem. If I run make -k it occurs on several of the build products including the main ParaView application.
(0029282)
Utkarsh Ayachit   
2012-09-25 11:14   
Is this still problem with the latest git-master? We have nightly builds on Lion plus I use Lion with Clang for my development without any issues. If problems persist, please attach your CMakeCache.txt
(0029369)
Pat Marion   
2012-10-12 12:22   
Do you have HDF5 installed from macports? There is a discussion about this on the paraview mailing list. See the email with subject: [Paraview] MacOSX Linking problems

You should uninstall HDF5 from macports, or try the advice I posted in the email.

I believe it could be avoided by changing VTK's cmake scripts. I've seen this on every mac where hdf5 is installed by macports.
(0029370)
Antonio LaTorre   
2012-10-15 09:02   
Thanks Pat. It can be compiled flawlessly with the last version of the Git repo given that the system HDF5 is deactivated (no need to uninstall it, just deactivate it) in MacPorts.