vtkPANLSubhaloFinder Class Reference

This filter takes the output of the HACC halo finder and runs the subhalo finder on a user-specified list of halos. More...

#include <vtkPANLSubhaloFinder.h>

Inheritance diagram for vtkPANLSubhaloFinder:

Collaboration diagram for vtkPANLSubhaloFinder:

Public Types
enum	{ ALL_HALOS = 0, HALOS_LARGER_THAN_THRESHOLD = 1, ONLY_SELECTED_HALOS = 2 }
Public Types inherited from vtkPassInputTypeAlgorithm
typedef vtkAlgorithm	Superclass
Public Types inherited from vtkAlgorithm
enum	DesiredOutputPrecision
enum	DesiredOutputPrecision
typedef vtkObject	Superclass

Public Member Functions
void	PrintSelf (ostream &os, vtkIndent indent)
vtkIdType	GetHaloToProcess (vtkIdType idx)
	Gets the halo to process at the given index This list is used when the filter is in ONLY_SELECTED_HALOS mode. More...
void	AddHaloToProcess (vtkIdType haloId)
	Adds a halo to the list of halos that will have the subhalo finder run on them This list is used when the filter is in ONLY_SELECTED_HALOS mode. More...
void	SetHaloToProcess (vtkIdType idx, vtkIdType haloId)
	Sets the halo id to process at the given index in the list This list is used when the filter is in ONLY_SELECTED_HALOS mode. More...
void	SetNumberOfHalosToProcess (vtkIdType num)
	Sets the number of halos to process This list is used when the filter is in ONLY_SELECTED_HALOS mode. More...
vtkIdType	GetNumberOfHalosToProcess ()
	Gets the number of halos to process This list is used when the filter is in ONLY_SELECTED_HALOS mode. More...
void	ClearHalosToProcess ()
	Clears the list of halos that will have the subhalo finder run on them This list is used when the filter is in ONLY_SELECTED_HALOS mode. More...
virtual void	SetMode (int)
	Sets/Gets the mode of the subhalo finding filter. More...
virtual int	GetMode ()
	Sets/Gets the mode of the subhalo finding filter. More...
virtual void	SetSizeThreshold (vtkIdType)
	Sets/Gets the size threshold which is the minimum number of particles in the halos that will have the subhalo finder run on them in HALOS_LARGER_THAN_THRESHOLD mode. More...
virtual vtkIdType	GetSizeThreshold ()
	Sets/Gets the size threshold which is the minimum number of particles in the halos that will have the subhalo finder run on them in HALOS_LARGER_THAN_THRESHOLD mode. More...
virtual void	SetRL (double)
	Gets/Sets RL, the physical coordinate box size Default: 256.0. More...
virtual double	GetRL ()
	Gets/Sets RL, the physical coordinate box size Default: 256.0. More...
virtual void	SetDeadSize (double)
	Gets/Sets the size of the ghost particle region around each process's particles to exchange when creating ghost particles. More...
virtual double	GetDeadSize ()
	Gets/Sets the size of the ghost particle region around each process's particles to exchange when creating ghost particles. More...
virtual void	SetParticleMass (float)
	Gets/Sets the particle mass. More...
virtual float	GetParticleMass ()
	Gets/Sets the particle mass. More...
virtual void	SetBB (double)
	Gets/Sets distance threshold for particles to be considered in the same halo. More...
virtual double	GetBB ()
	Gets/Sets distance threshold for particles to be considered in the same halo. More...
virtual void	SetAlphaFactor (double)
	Gets/Sets alpha factor. More...
virtual double	GetAlphaFactor ()
	Gets/Sets alpha factor. More...
virtual void	SetBetaFactor (double)
	Gets/Sets beta factor. More...
virtual double	GetBetaFactor ()
	Gets/Sets beta factor. More...
virtual void	SetMinCandidateSize (int)
	Gets/Sets the minimum size of a subhalo candidate Default: 200. More...
virtual int	GetMinCandidateSize ()
	Gets/Sets the minimum size of a subhalo candidate Default: 200. More...
virtual void	SetNumSPHNeighbors (int)
	Gets/Sets NumSPHNeighbors Default: 64. More...
virtual int	GetNumSPHNeighbors ()
	Gets/Sets NumSPHNeighbors Default: 64. More...
virtual void	SetNumNeighbors (int)
	Gets/Sets the number of neighbors that are examined by the subhalo finder to determine local clumps near the each particle Default: 20. More...
virtual int	GetNumNeighbors ()
	Gets/Sets the number of neighbors that are examined by the subhalo finder to determine local clumps near the each particle Default: 20. More...
Public Member Functions inherited from vtkPassInputTypeAlgorithm
vtkPassInputTypeAlgorithm *	NewInstance () const
vtkPolyData *	GetPolyDataOutput ()
vtkStructuredPoints *	GetStructuredPointsOutput ()
vtkImageData *	GetImageDataOutput ()
vtkStructuredGrid *	GetStructuredGridOutput ()
vtkUnstructuredGrid *	GetUnstructuredGridOutput ()
vtkRectilinearGrid *	GetRectilinearGridOutput ()
vtkTable *	GetTableOutput ()
vtkGraph *	GetGraphOutput ()
vtkDataObject *	GetInput ()
vtkDataObject *	GetOutput ()
vtkDataObject *	GetOutput (int)
void	SetInputData (vtkDataObject *)
void	SetInputData (int, vtkDataObject *)
void	AddInputData (vtkDataObject *)
void	AddInputData (int, vtkDataObject *)
virtual int	ProcessRequest (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
vtkDataObject *	GetOutput ()
vtkDataObject *	GetOutput (int)
void	SetInputData (vtkDataObject *)
void	SetInputData (int, vtkDataObject *)
void	AddInputData (vtkDataObject *)
void	AddInputData (int, vtkDataObject *)
virtual int	ProcessRequest (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
Public Member Functions inherited from vtkAlgorithm
vtkAlgorithm *	NewInstance () const
int	HasExecutive ()
vtkExecutive *	GetExecutive ()
virtual void	SetExecutive (vtkExecutive *executive)
virtual int	ModifyRequest (vtkInformation *request, int when)
vtkInformation *	GetInputPortInformation (int port)
vtkInformation *	GetOutputPortInformation (int port)
int	GetNumberOfInputPorts ()
int	GetNumberOfOutputPorts ()
void	UpdateProgress (double amount)
vtkInformation *	GetInputArrayInformation (int idx)
void	RemoveAllInputs ()
vtkDataObject *	GetOutputDataObject (int port)
virtual void	RemoveInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	RemoveInputConnection (int port, int idx)
virtual void	RemoveAllInputConnections (int port)
int	GetNumberOfInputConnections (int port)
int	GetTotalNumberOfInputConnections ()
vtkAlgorithmOutput *	GetInputConnection (int port, int index)
vtkAlgorithm *	GetInputAlgorithm (int port, int index, int &algPort)
vtkAlgorithm *	GetInputAlgorithm (int port, int index)
vtkExecutive *	GetInputExecutive (int port, int index)
vtkInformation *	GetInputInformation (int port, int index)
vtkInformation *	GetOutputInformation (int port)
virtual int	Update (int port, vtkInformationVector *requests)
virtual int	Update (vtkInformation *requests)
virtual int	UpdateExtent (const int extents[6])
virtual void	UpdateInformation ()
virtual void	UpdateDataObject ()
virtual void	PropagateUpdateExtent ()
virtual void	UpdateWholeExtent ()
void	ConvertTotalInputToPortConnection (int ind, int &port, int &conn)
int	SetUpdateExtentToWholeExtent (int port)
int	SetUpdateExtentToWholeExtent ()
void	SetUpdateExtent (int port, int extent[6])
void	SetUpdateExtent (int extent[6])
int	ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
virtual int	ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
virtual vtkInformation *	GetInformation ()
virtual void	SetInformation (vtkInformation *)
void	Register (vtkObjectBase *o) VTK_OVERRIDE
void	UnRegister (vtkObjectBase *o) VTK_OVERRIDE
virtual void	SetAbortExecute (int)
virtual int	GetAbortExecute ()
virtual void	AbortExecuteOn ()
virtual void	AbortExecuteOff ()
virtual void	SetProgress (double)
virtual double	GetProgress ()
void	SetProgressText (const char *ptext)
virtual char *	GetProgressText ()
virtual unsigned long	GetErrorCode ()
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)
virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
vtkDataObject *	GetInputDataObject (int port, int connection)
virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	SetInputConnection (vtkAlgorithmOutput *input)
virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	AddInputConnection (vtkAlgorithmOutput *input)
virtual void	SetInputDataObject (int port, vtkDataObject *data)
virtual void	SetInputDataObject (vtkDataObject *data)
virtual void	AddInputDataObject (int port, vtkDataObject *data)
virtual void	AddInputDataObject (vtkDataObject *data)
vtkAlgorithmOutput *	GetOutputPort (int index)
vtkAlgorithmOutput *	GetOutputPort ()
vtkAlgorithm *	GetInputAlgorithm ()
vtkExecutive *	GetInputExecutive ()
vtkInformation *	GetInputInformation ()
virtual void	Update (int port)
virtual void	Update ()
virtual int	UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=0)
virtual int	UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=0)
virtual void	SetReleaseDataFlag (int)
virtual int	GetReleaseDataFlag ()
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
int	UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
void	SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)
void	SetUpdateExtent (int piece, int numPieces, int ghostLevel)
int *	GetUpdateExtent ()
int *	GetUpdateExtent (int port)
void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
void	GetUpdateExtent (int extent[6])
void	GetUpdateExtent (int port, int extent[6])
int	GetUpdatePiece ()
int	GetUpdatePiece (int port)
int	GetUpdateNumberOfPieces ()
int	GetUpdateNumberOfPieces (int port)
int	GetUpdateGhostLevel ()
int	GetUpdateGhostLevel (int port)
void	SetProgressObserver (vtkProgressObserver *)
virtual vtkProgressObserver *	GetProgressObserver ()
int	ProcessRequest (vtkInformation *request, vtkCollection *inInfo, vtkInformationVector *outInfo)
virtual int	ComputePipelineMTime (vtkInformation *request, vtkInformationVector **inInfoVec, vtkInformationVector *outInfoVec, int requestFromOutputPort, vtkMTimeType *mtime)
virtual vtkInformation *	GetInformation ()
virtual void	SetInformation (vtkInformation *)
void	Register (vtkObjectBase *o) VTK_OVERRIDE
void	UnRegister (vtkObjectBase *o) VTK_OVERRIDE
virtual void	SetAbortExecute (int)
virtual int	GetAbortExecute ()
virtual void	AbortExecuteOn ()
virtual void	AbortExecuteOff ()
virtual void	SetProgress (double)
virtual double	GetProgress ()
void	SetProgressText (const char *ptext)
virtual char *	GetProgressText ()
virtual unsigned long	GetErrorCode ()
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, const char *name)
virtual void	SetInputArrayToProcess (int idx, int port, int connection, int fieldAssociation, int fieldAttributeType)
virtual void	SetInputArrayToProcess (int idx, vtkInformation *info)
virtual void	SetInputArrayToProcess (int idx, int port, int connection, const char *fieldAssociation, const char *attributeTypeorName)
vtkDataObject *	GetInputDataObject (int port, int connection)
virtual void	SetInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	SetInputConnection (vtkAlgorithmOutput *input)
virtual void	AddInputConnection (int port, vtkAlgorithmOutput *input)
virtual void	AddInputConnection (vtkAlgorithmOutput *input)
virtual void	SetInputDataObject (int port, vtkDataObject *data)
virtual void	SetInputDataObject (vtkDataObject *data)
virtual void	AddInputDataObject (int port, vtkDataObject *data)
virtual void	AddInputDataObject (vtkDataObject *data)
vtkAlgorithmOutput *	GetOutputPort (int index)
vtkAlgorithmOutput *	GetOutputPort ()
vtkAlgorithm *	GetInputAlgorithm ()
vtkExecutive *	GetInputExecutive ()
vtkInformation *	GetInputInformation ()
virtual void	Update (int port)
virtual void	Update ()
virtual int	UpdatePiece (int piece, int numPieces, int ghostLevels, const int extents[6]=0)
virtual int	UpdateTimeStep (double time, int piece=-1, int numPieces=1, int ghostLevels=0, const int extents[6]=0)
virtual void	SetReleaseDataFlag (int)
virtual int	GetReleaseDataFlag ()
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
int	UpdateExtentIsEmpty (vtkInformation *pinfo, vtkDataObject *output)
int	UpdateExtentIsEmpty (vtkInformation *pinfo, int extentType)
void	SetUpdateExtent (int port, int piece, int numPieces, int ghostLevel)
void	SetUpdateExtent (int piece, int numPieces, int ghostLevel)
int *	GetUpdateExtent ()
int *	GetUpdateExtent (int port)
void	GetUpdateExtent (int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
void	GetUpdateExtent (int port, int &x0, int &x1, int &y0, int &y1, int &z0, int &z1)
void	GetUpdateExtent (int extent[6])
void	GetUpdateExtent (int port, int extent[6])
int	GetUpdatePiece ()
int	GetUpdatePiece (int port)
int	GetUpdateNumberOfPieces ()
int	GetUpdateNumberOfPieces (int port)
int	GetUpdateGhostLevel ()
int	GetUpdateGhostLevel (int port)
void	SetProgressObserver (vtkProgressObserver *)
virtual vtkProgressObserver *	GetProgressObserver ()
Public Member Functions inherited from vtkObject
	vtkBaseTypeMacro (vtkObject, vtkObjectBase)
virtual void	DebugOn ()
virtual void	DebugOff ()
bool	GetDebug ()
void	SetDebug (bool debugFlag)
virtual void	Modified ()
virtual vtkMTimeType	GetMTime ()
void	RemoveObserver (unsigned long tag)
void	RemoveObservers (unsigned long event)
void	RemoveObservers (const char *event)
void	RemoveAllObservers ()
int	HasObserver (unsigned long event)
int	HasObserver (const char *event)
int	InvokeEvent (unsigned long event)
int	InvokeEvent (const char *event)
unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
unsigned long	AddObserver (const char *event, vtkCommand *, float priority=0.0f)
vtkCommand *	GetCommand (unsigned long tag)
void	RemoveObserver (vtkCommand *)
void	RemoveObservers (unsigned long event, vtkCommand *)
void	RemoveObservers (const char *event, vtkCommand *)
int	HasObserver (unsigned long event, vtkCommand *)
int	HasObserver (const char *event, vtkCommand *)
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
unsigned long	AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
int	InvokeEvent (unsigned long event, void *callData)
int	InvokeEvent (const char *event, void *callData)
unsigned long	AddObserver (unsigned long event, vtkCommand *, float priority=0.0f)
unsigned long	AddObserver (const char *event, vtkCommand *, float priority=0.0f)
vtkCommand *	GetCommand (unsigned long tag)
void	RemoveObserver (vtkCommand *)
void	RemoveObservers (unsigned long event, vtkCommand *)
void	RemoveObservers (const char *event, vtkCommand *)
int	HasObserver (unsigned long event, vtkCommand *)
int	HasObserver (const char *event, vtkCommand *)
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(), float priority=0.0f)
unsigned long	AddObserver (unsigned long event, U observer, void(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
unsigned long	AddObserver (unsigned long event, U observer, bool(T::*callback)(vtkObject *, unsigned long, void *), float priority=0.0f)
int	InvokeEvent (unsigned long event, void *callData)
int	InvokeEvent (const char *event, void *callData)
Public Member Functions inherited from vtkObjectBase
const char *	GetClassName () const
virtual void	Delete ()
virtual void	FastDelete ()
void	Print (ostream &os)
void	SetReferenceCount (int)
virtual void	PrintHeader (ostream &os, vtkIndent indent)
virtual void	PrintTrailer (ostream &os, vtkIndent indent)
int	GetReferenceCount ()
void	PrintRevisions (ostream &)
virtual void	PrintHeader (ostream &os, vtkIndent indent)
virtual void	PrintTrailer (ostream &os, vtkIndent indent)
int	GetReferenceCount ()
void	PrintRevisions (ostream &)

Static Public Member Functions
static vtkPANLSubhaloFinder *	New ()
Static Public Member Functions inherited from vtkPassInputTypeAlgorithm
static vtkPassInputTypeAlgorithm *	New ()
static int	IsTypeOf (const char *type)
static vtkPassInputTypeAlgorithm *	SafeDownCast (vtkObjectBase *o)
Static Public Member Functions inherited from vtkAlgorithm
static vtkAlgorithm *	New ()
static int	IsTypeOf (const char *type)
static vtkAlgorithm *	SafeDownCast (vtkObjectBase *o)
static vtkInformationIntegerKey *	INPUT_IS_OPTIONAL ()
static vtkInformationIntegerKey *	INPUT_IS_REPEATABLE ()
static vtkInformationInformationVectorKey *	INPUT_REQUIRED_FIELDS ()
static vtkInformationStringVectorKey *	INPUT_REQUIRED_DATA_TYPE ()
static vtkInformationInformationVectorKey *	INPUT_ARRAYS_TO_PROCESS ()
static vtkInformationIntegerKey *	INPUT_PORT ()
static vtkInformationIntegerKey *	INPUT_CONNECTION ()
static vtkInformationIntegerKey *	CAN_PRODUCE_SUB_EXTENT ()
static vtkInformationIntegerKey *	CAN_HANDLE_PIECE_REQUEST ()
static void	SetDefaultExecutivePrototype (vtkExecutive *proto)
Static Public Member Functions inherited from vtkObject
static vtkObject *	New ()
static void	BreakOnError ()
static void	SetGlobalWarningDisplay (int val)
static void	GlobalWarningDisplayOn ()
static void	GlobalWarningDisplayOff ()
static int	GetGlobalWarningDisplay ()
static void	SetGlobalWarningDisplay (int val)
static void	GlobalWarningDisplayOn ()
static void	GlobalWarningDisplayOff ()
static int	GetGlobalWarningDisplay ()
Static Public Member Functions inherited from vtkObjectBase
static vtkTypeBool	IsTypeOf (const char *name)
static vtkObjectBase *	New ()
static vtkObjectBase *	New ()

Protected Member Functions
	vtkPANLSubhaloFinder ()
virtual	~vtkPANLSubhaloFinder ()
int	FillInputPortInformation (int port, vtkInformation *info)
virtual int	RequestInformation (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	RequestData (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
Protected Member Functions inherited from vtkPassInputTypeAlgorithm
virtual vtkObjectBase *	NewInstanceInternal () const
	vtkPassInputTypeAlgorithm ()
	~vtkPassInputTypeAlgorithm ()
virtual int	RequestUpdateTime (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	RequestUpdateTimeDependentInformation (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	FillOutputPortInformation (int port, vtkInformation *info)
vtkDataObject *	GetInput (int port)
virtual int	RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	RequestDataObject (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
virtual int	RequestUpdateExtent (vtkInformation *, vtkInformationVector **, vtkInformationVector *)
virtual int	RequestDataObject (vtkInformation *request, vtkInformationVector **inputVector, vtkInformationVector *outputVector)
Protected Member Functions inherited from vtkAlgorithm
	vtkAlgorithm ()
	~vtkAlgorithm ()
virtual void	SetNumberOfInputPorts (int n)
virtual void	SetNumberOfOutputPorts (int n)
int	InputPortIndexInRange (int index, const char *action)
int	OutputPortIndexInRange (int index, const char *action)
int	GetInputArrayAssociation (int idx, vtkInformationVector **inputVector)
virtual vtkExecutive *	CreateDefaultExecutive ()
void	ReportReferences (vtkGarbageCollector *) VTK_OVERRIDE
virtual void	SetNumberOfInputConnections (int port, int n)
int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
int	GetInputArrayAssociation (int idx, vtkDataObject *input)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
void	SetInputDataInternal (int port, vtkDataObject *input)
void	AddInputDataInternal (int port, vtkDataObject *input)
int	GetInputArrayAssociation (int idx, int connection, vtkInformationVector **inputVector)
int	GetInputArrayAssociation (int idx, vtkDataObject *input)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
vtkDataArray *	GetInputArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input)
vtkDataArray *	GetInputArrayToProcess (int idx, vtkDataObject *input, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkInformationVector **inputVector, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, int connection, vtkInformationVector **inputVector, int &association)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input)
vtkAbstractArray *	GetInputAbstractArrayToProcess (int idx, vtkDataObject *input, int &association)
vtkInformation *	GetInputArrayFieldInformation (int idx, vtkInformationVector **inputVector)
virtual void	SetErrorCode (unsigned long)
virtual void	SetNthInputConnection (int port, int index, vtkAlgorithmOutput *input)
void	SetInputDataInternal (int port, vtkDataObject *input)
void	AddInputDataInternal (int port, vtkDataObject *input)
Protected Member Functions inherited from vtkObject
	vtkObject ()
virtual	~vtkObject ()
void	RegisterInternal (vtkObjectBase *, vtkTypeBool check) VTK_OVERRIDE
void	UnRegisterInternal (vtkObjectBase *, vtkTypeBool check) VTK_OVERRIDE
void	InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL)
void	InternalReleaseFocus ()
void	InternalGrabFocus (vtkCommand *mouseEvents, vtkCommand *keypressEvents=NULL)
void	InternalReleaseFocus ()
Protected Member Functions inherited from vtkObjectBase
	vtkObjectBase ()
virtual	~vtkObjectBase ()
virtual void	CollectRevisions (ostream &)
	vtkObjectBase (const vtkObjectBase &)
void	operator= (const vtkObjectBase &)

Protected Attributes
double	RL
double	DeadSize
double	BB
double	ParticleMass
double	AlphaFactor
double	BetaFactor
int	MinCandidateSize
int	NumSPHNeighbors
int	NumNeighbors
int	Mode
vtkIdType	SizeThreshold
vtkNew< vtkIdList >	HalosToProcess
vtkMultiProcessController *	Controller
vtkInternals *	Internal
Protected Attributes inherited from vtkAlgorithm
vtkInformation *	Information
double	Progress
char *	ProgressText
vtkProgressObserver *	ProgressObserver
unsigned long	ErrorCode
Protected Attributes inherited from vtkObject
bool	Debug
vtkTimeStamp	MTime
vtkSubjectHelper *	SubjectHelper
Protected Attributes inherited from vtkObjectBase
vtkAtomicInt32	ReferenceCount
vtkWeakPointerBase **	WeakPointers

Additional Inherited Members
Public Attributes inherited from vtkAlgorithm
	SINGLE_PRECISION
	DOUBLE_PRECISION
	DEFAULT_PRECISION
int	AbortExecute
Static Protected Member Functions inherited from vtkAlgorithm
static vtkInformationIntegerKey *	PORT_REQUIREMENTS_FILLED ()
Static Protected Attributes inherited from vtkAlgorithm
static vtkExecutive *	DefaultExecutivePrototype

Detailed Description

This filter takes the output of the HACC halo finder and runs the subhalo finder on a user-specified list of halos.

The input should be a vtkUnstructuredGrid with the data arrays vx, vy, vz, id and fof_halo_tag. AddHaloToProcess should be used to select which halos to find subhalos of.

The first output is a vtkUnstructuredGrid similar to the input but with the data array subhalo_tag appended to indicate which subhalo a point lies in. The value will be -1 for points in no halo.

The second output is a vtkUnstructuredGrid with one point per subhalo and data arrays for summary information such as average velocity, mass, and center of mass.

Definition at line 34 of file vtkPANLSubhaloFinder.h.

Member Enumeration Documentation

anonymous enum

anonymous enum

Enumerator
ALL_HALOS
HALOS_LARGER_THAN_THRESHOLD
ONLY_SELECTED_HALOS

Definition at line 42 of file vtkPANLSubhaloFinder.h.

Constructor & Destructor Documentation

vtkPANLSubhaloFinder()

vtkPANLSubhaloFinder::vtkPANLSubhaloFinder ( )

protected

~vtkPANLSubhaloFinder()

virtual vtkPANLSubhaloFinder::~vtkPANLSubhaloFinder ( )

protectedvirtual

Member Function Documentation

New()

static vtkPANLSubhaloFinder* vtkPANLSubhaloFinder::New ( )

static

PrintSelf()

void vtkPANLSubhaloFinder::PrintSelf ( ostream &  os, vtkIndent  indent  )

virtual

Reimplemented from vtkPassInputTypeAlgorithm.

SetMode()

virtual void vtkPANLSubhaloFinder::SetMode ( int  )

virtual

Sets/Gets the mode of the subhalo finding filter.

It should be one of the values ALL_HALOS - find subhalos of all halos (default) HALOS_LARGER_THAN_THRESHOLD - finds subhalos of all halos with more than SizeThreshold values (sizeThreshold is a settable parameter) ONLY_SELECTED_HALOS - finds subhalos of only the halos in the HalosToProcess list

GetMode()

virtual int vtkPANLSubhaloFinder::GetMode ( )

virtual

Sets/Gets the mode of the subhalo finding filter.

It should be one of the values ALL_HALOS - find subhalos of all halos (default) HALOS_LARGER_THAN_THRESHOLD - finds subhalos of all halos with more than SizeThreshold values (sizeThreshold is a settable parameter) ONLY_SELECTED_HALOS - finds subhalos of only the halos in the HalosToProcess list

SetSizeThreshold()

virtual void vtkPANLSubhaloFinder::SetSizeThreshold ( vtkIdType  )

virtual

Sets/Gets the size threshold which is the minimum number of particles in the halos that will have the subhalo finder run on them in HALOS_LARGER_THAN_THRESHOLD mode.

Defaults to 1000.

GetSizeThreshold()

virtual vtkIdType vtkPANLSubhaloFinder::GetSizeThreshold ( )

virtual

Sets/Gets the size threshold which is the minimum number of particles in the halos that will have the subhalo finder run on them in HALOS_LARGER_THAN_THRESHOLD mode.

Defaults to 1000.

GetHaloToProcess()

vtkIdType vtkPANLSubhaloFinder::GetHaloToProcess

(

vtkIdType

idx

)

Gets the halo to process at the given index This list is used when the filter is in ONLY_SELECTED_HALOS mode.

AddHaloToProcess()

void vtkPANLSubhaloFinder::AddHaloToProcess

(

vtkIdType

haloId

)

Adds a halo to the list of halos that will have the subhalo finder run on them This list is used when the filter is in ONLY_SELECTED_HALOS mode.

SetHaloToProcess()

void vtkPANLSubhaloFinder::SetHaloToProcess	(	vtkIdType	idx,
		vtkIdType	haloId
	)

Sets the halo id to process at the given index in the list This list is used when the filter is in ONLY_SELECTED_HALOS mode.

SetNumberOfHalosToProcess()

void vtkPANLSubhaloFinder::SetNumberOfHalosToProcess

(

vtkIdType

num

)

Sets the number of halos to process This list is used when the filter is in ONLY_SELECTED_HALOS mode.

GetNumberOfHalosToProcess()

vtkIdType vtkPANLSubhaloFinder::GetNumberOfHalosToProcess

(

)

Gets the number of halos to process This list is used when the filter is in ONLY_SELECTED_HALOS mode.

ClearHalosToProcess()

void vtkPANLSubhaloFinder::ClearHalosToProcess

(

)

Clears the list of halos that will have the subhalo finder run on them This list is used when the filter is in ONLY_SELECTED_HALOS mode.

SetRL()

virtual void vtkPANLSubhaloFinder::SetRL ( double  )

virtual

Gets/Sets RL, the physical coordinate box size Default: 256.0.

GetRL()

virtual double vtkPANLSubhaloFinder::GetRL ( )

virtual

Gets/Sets RL, the physical coordinate box size Default: 256.0.

SetDeadSize()

virtual void vtkPANLSubhaloFinder::SetDeadSize ( double  )

virtual

Gets/Sets the size of the ghost particle region around each process's particles to exchange when creating ghost particles.

Default: 8.0

GetDeadSize()

virtual double vtkPANLSubhaloFinder::GetDeadSize ( )

virtual

Gets/Sets the size of the ghost particle region around each process's particles to exchange when creating ghost particles.

Default: 8.0

SetParticleMass()

virtual void vtkPANLSubhaloFinder::SetParticleMass ( float  )

virtual

Gets/Sets the particle mass.

For input datasets that do not have mass information the mass of each particle defaults to this value. Default: 1.307087181e+09

GetParticleMass()

virtual float vtkPANLSubhaloFinder::GetParticleMass ( )

virtual

Gets/Sets the particle mass.

For input datasets that do not have mass information the mass of each particle defaults to this value. Default: 1.307087181e+09

SetBB()

virtual void vtkPANLSubhaloFinder::SetBB ( double  )

virtual

Gets/Sets distance threshold for particles to be considered in the same halo.

This is measured in grid units on a NP x NP x NP grid. Default: 0.1679999998

GetBB()

virtual double vtkPANLSubhaloFinder::GetBB ( )

virtual

Gets/Sets distance threshold for particles to be considered in the same halo.

This is measured in grid units on a NP x NP x NP grid. Default: 0.1679999998

SetAlphaFactor()

virtual void vtkPANLSubhaloFinder::SetAlphaFactor ( double  )

virtual

Gets/Sets alpha factor.

This controls how aggressively small subhalos are grown. Alpha factor of 1.0 is the least aggressive Default: 1.0

GetAlphaFactor()

virtual double vtkPANLSubhaloFinder::GetAlphaFactor ( )

virtual

Gets/Sets alpha factor.

This controls how aggressively small subhalos are grown. Alpha factor of 1.0 is the least aggressive Default: 1.0

SetBetaFactor()

virtual void vtkPANLSubhaloFinder::SetBetaFactor ( double  )

virtual

Gets/Sets beta factor.

This controls how saddle points between subhalos are treated. Larger values allow identification of smaller scale structures such as tails. Default: 0.0

GetBetaFactor()

virtual double vtkPANLSubhaloFinder::GetBetaFactor ( )

virtual

Gets/Sets beta factor.

This controls how saddle points between subhalos are treated. Larger values allow identification of smaller scale structures such as tails. Default: 0.0

SetMinCandidateSize()

virtual void vtkPANLSubhaloFinder::SetMinCandidateSize ( int  )

virtual

Gets/Sets the minimum size of a subhalo candidate Default: 200.

GetMinCandidateSize()

virtual int vtkPANLSubhaloFinder::GetMinCandidateSize ( )

virtual

Gets/Sets the minimum size of a subhalo candidate Default: 200.

SetNumSPHNeighbors()

virtual void vtkPANLSubhaloFinder::SetNumSPHNeighbors ( int  )

virtual

Gets/Sets NumSPHNeighbors Default: 64.

GetNumSPHNeighbors()

virtual int vtkPANLSubhaloFinder::GetNumSPHNeighbors ( )

virtual

Gets/Sets NumSPHNeighbors Default: 64.

SetNumNeighbors()

virtual void vtkPANLSubhaloFinder::SetNumNeighbors ( int  )

virtual

Gets/Sets the number of neighbors that are examined by the subhalo finder to determine local clumps near the each particle Default: 20.

GetNumNeighbors()

virtual int vtkPANLSubhaloFinder::GetNumNeighbors ( )

virtual

Gets/Sets the number of neighbors that are examined by the subhalo finder to determine local clumps near the each particle Default: 20.

FillInputPortInformation()

int vtkPANLSubhaloFinder::FillInputPortInformation ( int  port, vtkInformation *  info  )

protectedvirtual

Reimplemented from vtkPassInputTypeAlgorithm.

RequestInformation()

virtual int vtkPANLSubhaloFinder::RequestInformation ( vtkInformation *  , vtkInformationVector **  , vtkInformationVector *    )

protectedvirtual

Reimplemented from vtkPassInputTypeAlgorithm.

RequestData()

virtual int vtkPANLSubhaloFinder::RequestData ( vtkInformation *  , vtkInformationVector **  , vtkInformationVector *    )

protectedvirtual

Reimplemented from vtkPassInputTypeAlgorithm.

Member Data Documentation

RL

double vtkPANLSubhaloFinder::RL

protected

Definition at line 199 of file vtkPANLSubhaloFinder.h.

DeadSize

double vtkPANLSubhaloFinder::DeadSize

protected

Definition at line 200 of file vtkPANLSubhaloFinder.h.

BB

double vtkPANLSubhaloFinder::BB

protected

Definition at line 201 of file vtkPANLSubhaloFinder.h.

ParticleMass

double vtkPANLSubhaloFinder::ParticleMass

protected

Definition at line 202 of file vtkPANLSubhaloFinder.h.

AlphaFactor

double vtkPANLSubhaloFinder::AlphaFactor

protected

Definition at line 203 of file vtkPANLSubhaloFinder.h.

BetaFactor

double vtkPANLSubhaloFinder::BetaFactor

protected

Definition at line 204 of file vtkPANLSubhaloFinder.h.

MinCandidateSize

int vtkPANLSubhaloFinder::MinCandidateSize

protected

Definition at line 205 of file vtkPANLSubhaloFinder.h.

NumSPHNeighbors

int vtkPANLSubhaloFinder::NumSPHNeighbors

protected

Definition at line 206 of file vtkPANLSubhaloFinder.h.

NumNeighbors

int vtkPANLSubhaloFinder::NumNeighbors

protected

Definition at line 207 of file vtkPANLSubhaloFinder.h.

Mode

int vtkPANLSubhaloFinder::Mode

protected

Definition at line 209 of file vtkPANLSubhaloFinder.h.

SizeThreshold

vtkIdType vtkPANLSubhaloFinder::SizeThreshold

protected

Definition at line 210 of file vtkPANLSubhaloFinder.h.

HalosToProcess

vtkNew<vtkIdList> vtkPANLSubhaloFinder::HalosToProcess

protected

Definition at line 212 of file vtkPANLSubhaloFinder.h.

Controller

vtkMultiProcessController* vtkPANLSubhaloFinder::Controller

protected

Definition at line 213 of file vtkPANLSubhaloFinder.h.

Internal

vtkInternals* vtkPANLSubhaloFinder::Internal

protected

Definition at line 215 of file vtkPANLSubhaloFinder.h.

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The documentation for this class was generated from the following file:

• /builds/gitlab-kitware-sciviz-ci/VTKExtensions/CosmoTools/vtkPANLSubhaloFinder.h