[Paraview] ParaView 3.14.1 ADIOS reader build errors

Pettey . Lucas LPettey at drc.com
Wed Feb 6 12:25:20 EST 2013


Hello everyone,

I am trying to build ParaView 3.14 with the ADIOS Reader. I have the latest ADIOS 1.4.1 library built. I am receiving the following errors:

[ 98%] Building CXX object Plugins/AdiosReader/CMakeFiles/AdiosReaderPluginMPI.dir/vtkAdiosReader.cxx.o
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosReader.cxx:15:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosReader.h:22:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Filtering/vtkCompositeDataSetAlgorithm.h:25:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Filtering/vtkAlgorithm.h:32:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Common/vtkObject.h:41:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Common/vtkObjectBase.h:43:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Common/vtkIndent.h:24:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Common/vtkSystemIncludes.h:40:
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/VTK/Common/vtkIOStream.h:108:
In file included from /usr/include/c++/4.2.1/backward/strstream:51:
/usr/include/c++/4.2.1/backward/backward_warning.h:32:2: warning: This file includes at least one deprecated or antiquated header. Please consider using one of
      the 32 headers found in section 17.4.1.2 of the C++ standard. Examples include substituting the <X> header for the <X.h> header for C++ includes, or
      <iostream> instead of the deprecated header <iostream.h>. To disable this warning use -Wno-deprecated. [-W#warnings]
#warning This file includes at least one deprecated or antiquated header. \
 ^
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosReader.cxx:16:
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:108:41: error: no member named 'timedim' in 'ADIOS_VARINFO'
    this->TimeIndexComponent = varInfo->timedim; // -1 if no time steps
                               ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:110:50: error: no member named 'timedim' in 'ADIOS_VARINFO'
    this->Dimension = varInfo->ndim - ((varInfo->timedim == -1) ? 0 : 1); // The dimension here do not take the time into account
                                        ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:117:18: error: no member named 'gmin' in 'ADIOS_VARINFO'
    if (varInfo->gmin && varInfo->gmax)
        ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:117:35: error: no member named 'gmax' in 'ADIOS_VARINFO'
    if (varInfo->gmin && varInfo->gmax)
                         ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:121:52: error: no member named 'gmin' in 'ADIOS_VARINFO'
        this->Range[0] = (double)(*((int*)varInfo->gmin));
                                          ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:122:52: error: no member named 'gmax' in 'ADIOS_VARINFO'
        this->Range[1] = (double)(*((int*)varInfo->gmax));
                                          ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:126:54: error: no member named 'gmin' in 'ADIOS_VARINFO'
        this->Range[0] = (double)(*((float*)varInfo->gmin));
                                            ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:127:54: error: no member named 'gmax' in 'ADIOS_VARINFO'
        this->Range[1] = (double)(*((float*)varInfo->gmax));
                                            ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:131:55: error: no member named 'gmin' in 'ADIOS_VARINFO'
        this->Range[0] = (double)(*((double*)varInfo->gmin));
                                             ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:132:55: error: no member named 'gmax' in 'ADIOS_VARINFO'
        this->Range[1] = (double)(*((double*)varInfo->gmax));
                                             ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:139:40: error: no member named 'timedim' in 'ADIOS_VARINFO'
    if(this->Dimension > 3 || varInfo->timedim > 0)
                              ~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:1468:3: error: unknown type name 'ADIOS_GROUP'
  ADIOS_GROUP **Groups;
  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:397:18: error: use of undeclared identifier 'adios_fopen'
    this->File = adios_fopen(this->FileName.c_str(), (comm) ? *comm : 0);
                 ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:401:25: error: use of undeclared identifier 'err_end_of_file'; did you mean
      'err_end_of_stream'?
      if(adios_errno != err_end_of_file)
                        ^~~~~~~~~~~~~~~
                        err_end_of_stream
/usr/local/include/adios_error.h:35:5: note: 'err_end_of_stream' declared here
    err_end_of_stream                   = -21, /* stream: reached end of stream,
    ^
In file included from /Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosReader.cxx:16:
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:426:21: error: use of undeclared identifier 'ADIOS_GROUP'
    this->Groups = (ADIOS_GROUP **) malloc(this->File->groups_count * sizeof(ADIOS_GROUP *));
                    ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:426:35: error: expected expression
    this->Groups = (ADIOS_GROUP **) malloc(this->File->groups_count * sizeof(ADIOS_GROUP *));
                                  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:436:48: error: no member named 'ntimesteps' in 'ADIOS_FILE'
      cout << " - time steps: " << this->File->ntimesteps << " from " << this->File->tidx_start << endl;
                                   ~~~~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:436:86: error: no member named 'tidx_start' in 'ADIOS_FILE'
      cout << " - time steps: " << this->File->ntimesteps << " from " << this->File->tidx_start << endl;
                                                                         ~~~~~~~~~~  ^
/Users/lucaspettey/ParaView-3.14.1-Source/Plugins/AdiosReader/vtkAdiosInternals.h:437:44: error: no member named 'groups_count' in 'ADIOS_FILE'
      cout << " - groups: " << this->File->groups_count << endl;
                               ~~~~~~~~~~  ^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
1 warning and 20 errors generated.
make[2]: *** [Plugins/AdiosReader/CMakeFiles/AdiosReaderPluginMPI.dir/vtkAdiosReader.cxx.o] Error 1
make[1]: *** [Plugins/AdiosReader/CMakeFiles/AdiosReaderPluginMPI.dir/all] Error 2
make: *** [all] Error 2

Any advice would be appreciated.

Thanks,
Lucas
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