[Paraview] MacOSX Linking problems

Pat Marion pat.marion at kitware.com
Thu Oct 11 16:03:39 EDT 2012


Oops, I meant to say you should set VTK_USE_SYSTEM_HDF5 to ON.

Pat

On Thu, Oct 11, 2012 at 4:02 PM, Pat Marion <pat.marion at kitware.com> wrote:

> It looks the compiler included system HDF5 headers even though
> VTK_USE_SYSTEM_HDF5 is disabled.  Then, at link time it doesn't link the
> system HDF5 libraries because VTK_USE_SYSTEM_HDF5 if off.  You could try
> running cmake in the build dir and setting VTK_USE_SYSTEM_HDF5 to OFF.
>
> I think this might be caused by a tricky a bug in VTK's cmake scripts.  I
> guess CMake would need to add -IVTK/Utilities/vtkhdf5 before
> -I/opt/local/include when system hdf5 is off.
>
> Pat
>
>
> On Thu, Oct 11, 2012 at 3:46 PM, Brickle Macho <bricklemacho at gmail.com>wrote:
>
>> Hi,
>>
>> I am trying to build ParaView on my MacBook and I am getting a list of
>> undefined symbols.  Below is the first of about 35+ similar errors.  For
>> info all of the required supporting packages were installed by Macports.
>> I downloaded ParaView-3.14.1-Source from the website and created a separate
>> build directory. I received a that I was running Qt 4.8.3 whereas the
>> officially supported version is Qt 4.6.
>>
>> In case it is related, I had an earlier problem where during compiling
>> the generated makefile was expecting some Qt file under files in
>> /opt/local/lib/Resources/... whereas they were in
>> /opt/local/Library/Frameworks/**QtGui.framework/Versions/4/**Resources/...
>> I resolved this by creating a symbolic link in /opt/local/lib
>>
>> Not sure where to start to solve the problem. Any help appreciated.
>>
>> Regards,
>>
>> Michael.
>> --
>>
>> ------- Linking problem below ---------------
>>
>> [ 75%] Built target vtkPVVTKExtensionsCS
>> Linking CXX executable ../../../bin/**ParaViewCoreVTKExtensionsPrint**
>> Self
>> Undefined symbols for architecture x86_64:
>>   "_H5check_version", referenced from:
>>       vtkEnzoReaderInternal::**GetAttributeNames()       in
>> libvtkPVVTKExtensions.a(**vtkEnzoReader.cxx.o)
>>       vtkEnzoReader::LoadAttribute(**char const*, int)in
>> libvtkPVVTKExtensions.a(**vtkEnzoReader.cxx.o)
>>       vtkEnzoReader::GetParticles(**int, vtkPolyData*, int, int)in
>> libvtkPVVTKExtensions.a(**vtkEnzoReader.cxx.o)
>>       vtkFlashReaderInternal::**ReadMetaData()       in
>> libvtkPVVTKExtensions.a(**vtkFlashReader.cxx.o)
>>       vtkFlashReaderInternal::**GetTime()      in
>> libvtkPVVTKExtensions.a(**vtkFlashReader.cxx.o)
>>       vtkFlashReaderInternal::**GetCycle()      in
>> libvtkPVVTKExtensions.a(**vtkFlashReader.cxx.o)
>>      (maybe you meant: _vtk__H5check_version)
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