[Paraview] time series not working with xyz or lammps-dump reader && presenting millions of atoms by "spheres"

Christian Richter christian.richter at ovgu.de
Fri Jul 6 06:23:32 EDT 2012


Hi Jian,

for 1.) have a look at my liggghts text- and binary reader at 
http://web678.public1.linz.at/Drupal/?q=node/681 (you have to register 
to see the attached files) as a starting point for your own implemention.
for 2.) you can use the PointSprite Plugin, I've written a HowTo here: 
http://web678.public1.linz.at/Drupal/?q=system/files/howto_paraview.pdf

greez,
Christian

Am 05.07.2012 22:57, schrieb LUO Jian:
> Hello,
>
> I am new to this extremely powerful visualization tool and I use the 
> 3.14 version of paraview binary on windows 7 . Both binary and 
> compiled one on linux.
> I could not get the following 2 things to work for me.
>
> 1. The xyz and lammps-dump reader comes along with the binary, but I 
> do not see them in the compiled one, why?
>     Then with the binary, I try to load up multi-block xyz or 
> lammps-dump files, I can only get the first frame. I check 
> "Information" tab on the left, the "Index" and "Value" of Time is 
> blank. So there is something wrong. Both the xyz and lammps-dump files 
> are produced by lammps and can be recognized by other visualization 
> software. So I think I need to do something about the readers. So can 
> someone tell me how to get this done?
>    Eventually, I want to be able to add whatever readers in paraview 
> by myself so that I can stop converting hundreds of gigabytes of data 
> from one format to another.  First, I want to find the xyz and 
> lammps-dump readers within the source code and try to understand and 
> tweak them. Then I can follow the more comprehensive manual to do more 
> things. I just could not find them in the source folder, can someone 
> point them to me?
>
> 2. For publication purpose, I want to render the points as spheres 
> without "masking points". I tried the "sphere" option in "glyph" 
> filter. It worked pretty well when the number of "spheres" were 
> limited to 5000. But when I tried to represent a million atoms with 
> spheres, paraview won't be responding for a long time and I have to 
> kill the process. So I wondering if there is a way that I can present 
> millions of atoms with "sphere" in paraview more efficiently ?
>
> Thanks for your attention
>
> Best,
> Jian
>
>
>
>
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Dipl.-Ing. Christian Richter
Lehrstuhl für Materialflusstechnik
Institut für Logistik und Materialflusstechnik (ILM)
Fakultät für Maschinenbau (FMB)

Otto-von-Guericke-Universität Magdeburg
Universitätsplatz 2
D-39106 Magdeburg
Gebäude 10, Raum 213

University Magdeburg "Otto-von-Guericke"
Department of Material Handling
Institute of Logistics and Material Handling Systems (ILM)
Faculty for Mechanical Engineering (FMB)

E-Mail: christian.richter at ovgu.de
Tel.: +49 (0)391/67-*12690 NEU*
Fax: +49 (0)391/67-12646
URL: http://www.ilm.ovgu.de
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