[Paraview] Trouble running Paraview OSMesa in parallel on cluster

Cook, Rich cook47 at llnl.gov
Fri Nov 11 14:08:24 EST 2011


Hi, thanks, but you are incorrect.  
I did set that variable and it was indeed compiled with MPI, as I said.  

rcook at prism127 (IMG_private): type pvserver
pvserver is /usr/global/tools/Kitware/Paraview/3.12.0-OSMesa/chaos_4_x86_64_ib/bin/pvserver
rcook at prism127 (IMG_private): ldd  /usr/global/tools/Kitware/Paraview/3.12.0-OSMesa/chaos_4_x86_64_ib/bin/pvserver
        libmpi.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libmpi.so.0 (0x00002aaaaacc9000)
        libopen-rte.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libopen-rte.so.0 (0x00002aaaaaf6c000)
        libopen-pal.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libopen-pal.so.0 (0x00002aaaab1b7000)
        libdl.so.2 => /lib64/libdl.so.2 (0x00002aaaab434000)
        libnsl.so.1 => /lib64/libnsl.so.1 (0x00002aaaab638000)
        libutil.so.1 => /lib64/libutil.so.1 (0x00002aaaab850000)
        libm.so.6 => /lib64/libm.so.6 (0x00002aaaaba54000)
        libpthread.so.0 => /lib64/libpthread.so.0 (0x00002aaaabcd7000)
        libc.so.6 => /lib64/libc.so.6 (0x00002aaaabef2000)
        /lib64/ld-linux-x86-64.so.2 (0x00002aaaaaaab000)

When the pvservers are running, I can see that they are the correct binaries, and ldd confirms they are MPI-capable. 

rcook at prism120 (~): ldd  /collab/usr/global/tools/Kitware/Paraview/3.12.0-OSMesa/chaos_4_x86_64_ib/lib/paraview-3.12/pvserver | grep mpi
        libmpi_cxx.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libmpi_cxx.so.0 (0x00002aaab23bf000)
        libmpi.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libmpi.so.0 (0x00002aaab25da000)
        libopen-rte.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libopen-rte.so.0 (0x00002aaab287d000)
        libopen-pal.so.0 => /usr/local/tools/openmpi-gnu-1.4.3/lib/libopen-pal.so.0 (0x00002aaab2ac7000)


On Nov 11, 2011, at 11:04 AM, Utkarsh Ayachit wrote:

> Your pvserver is not built with MPI enabled. Please rebuild pvserver
> with CMake variable PARAVIEW_USE_MPI:BOOL=ON.
> 
> Utkarsh
> 
> On Fri, Nov 11, 2011 at 1:54 PM, Cook, Rich <cook47 at llnl.gov> wrote:
>> We have a tricky firewall situation here so I have to use reverse tunneling per http://www.paraview.org/Wiki/Reverse_connection_and_port_forwarding#Reverse_Connection_Over_an_ssh_Tunnel
>> 
>> I'm not sure I'm doing it right.  I can do it with a single server, but when I try to run in parallel, it looks like something is broken.  My understanding is that when launched under MPI, the servers should talk to eachother and only one of the servers should try to connect back to the client.  I compiled with MPI, and am running in an MPI environment, but it looks as though the pvservers are not talking to each other but are each trying to make their own connection to the client.  Below is the output.  Can anyone help me get this up and running?  I know I'm close.
>> 
>> Thanks!
>> 
>> rcook at prism127 (IMG_private): srun -n 8 /usr/global/tools/Kitware/Paraview/3.12.0-OSMesa/chaos_4_x86_64_ib/bin/pvserver --use-offscreen-rendering  --reverse-connection  --client-host=localhost
>> Waiting for client
>> Connection URL: csrc://localhost:11111
>> Client connected.
>> Waiting for client
>> Connection URL: csrc://localhost:11111
>> ERROR: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/VTK/Common/vtkSocket.cxx, line 481
>> vtkClientSocket (0xd8ee20): Socket error in call to connect. Connection refused.
>> 
>> ERROR: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/VTK/Common/vtkClientSocket.cxx, line 53
>> vtkClientSocket (0xd8ee20): Failed to connect to server localhost:11111
>> 
>> Warning: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/ParaViewCore/ClientServerCore/vtkTCPNetworkAccessManager.cxx, line 250
>> vtkTCPNetworkAccessManager (0x6619a0): Connect failed.  Retrying for 59.9994 more seconds.
>> 
>> ERROR: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/VTK/Common/vtkSocket.cxx, line 481
>> vtkClientSocket (0xd8ee20): Socket error in call to connect. Connection refused.
>> 
>> ERROR: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/VTK/Common/vtkClientSocket.cxx, line 53
>> vtkClientSocket (0xd8ee20): Failed to connect to server localhost:11111
>> 
>> Warning: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/ParaViewCore/ClientServerCore/vtkTCPNetworkAccessManager.cxx, line 250
>> vtkTCPNetworkAccessManager (0x6619a0): Connect failed.  Retrying for 58.9972 more seconds.
>> 
>> ERROR: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/VTK/Common/vtkSocket.cxx, line 481
>> vtkClientSocket (0xd8ee20): Socket error in call to connect. Connection refused.
>> 
>> ERROR: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/VTK/Common/vtkClientSocket.cxx, line 53
>> vtkClientSocket (0xd8ee20): Failed to connect to server localhost:11111
>> 
>> Warning: In /nfs/tmp2/rcook/ParaView/3.12.0/ParaView-3.12.0/ParaViewCore/ClientServerCore/vtkTCPNetworkAccessManager.cxx, line 250
>> vtkTCPNetworkAccessManager (0x6619a0): Connect failed.  Retrying for 57.9952 more seconds.
>> 
>> 
>> etc. etc. etc.
>> --
>> ✐Richard Cook
>> ✇ Lawrence Livermore National Laboratory
>> Bldg-453 Rm-4024, Mail Stop L-557
>> 7000 East Avenue,  Livermore, CA, 94550, USA
>> ☎ (office) (925) 423-9605
>> ☎ (fax) (925) 423-6961
>> ---
>> Information Management & Graphics Grp., Services & Development Div., Integrated Computing & Communications Dept.
>> (opinions expressed herein are mine and not those of LLNL)
>> 
>> 
>> 
>> _______________________________________________
>> Powered by www.kitware.com
>> 
>> Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html
>> 
>> Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView
>> 
>> Follow this link to subscribe/unsubscribe:
>> http://www.paraview.org/mailman/listinfo/paraview
>> 

-- 
✐Richard Cook   
✇ Lawrence Livermore National Laboratory
Bldg-453 Rm-4024, Mail Stop L-557        
7000 East Avenue,  Livermore, CA, 94550, USA
☎ (office) (925) 423-9605    
☎ (fax) (925) 423-6961
---
Information Management & Graphics Grp., Services & Development Div., Integrated Computing & Communications Dept.
(opinions expressed herein are mine and not those of LLNL)





More information about the ParaView mailing list