Particle simulations: Difference between revisions

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* Open ParaView, and read in your dataset.
* Open ParaView, and read in your dataset.
* If you are running ParaView 3.6.0 or 3.4.0, you will want to reset the point sizes.  Display tab/ Style/ Point size 2 (or 1, depending on your preference).  The following picture holds about 250,000 points.
* If you are running ParaView 3.6.0 or 3.4.0, you will want to reset the point sizes.  Display tab/ Style/ Point size 2 (or 1, depending on your preference).  The following picture holds about 250,000 points.


[[Image:particles_1.png|800px]]
[[Image:particles_1.png|800px]]


* You may want to replace these particles with spheres or arrows, using the glyph filter.  The glyph filter will depopulate your dataset to a reasonable number of items, set by the "Maximum number of points" input box.  Random mode often creates better looking output, but is not useful if you animate through numerous time steps.  The following picture has arrows for particles, using vectors for direction and length, and colored by temperature.
* You may want to replace these particles with spheres or arrows, using the glyph filter.  The glyph filter will depopulate your dataset to a reasonable number of items, set by the "Maximum number of points" input box.  Random mode often creates better looking output, but is not useful if you animate through numerous time steps.  The following picture has arrows for particles, using vectors for direction and length, and colored by temperature.


[[Image:particles_2.png|800px]]
[[Image:particles_2.png|800px]]


* Another filter that is useful is the threshold filter.  Using the threshold filter, a user can select only those particles that are of interest.  For instance, the following picture only displays particles that have a temperature of 430 to 511 degrees.  Using the clip filter, the upper half of the picture has arrow glyphs, and the lower half has the particles themselves - all colored by temperature.
* Another filter that is useful is the threshold filter.  Using the threshold filter, a user can select only those particles that are of interest.  For instance, the following picture only displays particles that have a temperature of 430 to 511 degrees.  Using the clip filter, the upper half of the picture has arrow glyphs, and the lower half has the particles themselves - all colored by temperature.


[[Image:particles_3.png|800px]]
[[Image:particles_3.png|800px]]


*Finally, you can make a scatter plot through the calculator.  For instance, if we want to preserve the X and Y coordinates of our points, but use number of pizzas for the Z component, we would do the following:
*Finally, you can make a scatter plot through the calculator.  For instance, if we want to preserve the X and Y coordinates of our points, but use number of pizzas for the Z component, we would do the following:
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**Check the Coordinate Results check box.
**Check the Coordinate Results check box.
**Input the formula coordsX*iHat+coordsY*jHat+pizza*kHat.  This creates a vector, as follows: (X,Y,pizzas)
**Input the formula coordsX*iHat+coordsY*jHat+pizza*kHat.  This creates a vector, as follows: (X,Y,pizzas)


[[Image:particles_4.png|800px]]
[[Image:particles_4.png|800px]]
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This data is written in to a .vtk file.  Note that I have deleted a lot of the data, which will need to be recreated.  Also note that I added some random variable data - for instance, some locations have 1 or 2 pizzas.  This actually creates a funky dataset - with many points per cell, but it worked for display purposes.
This data is written in to a .vtk file.  Note that I have deleted a lot of the data, which will need to be recreated.  Also note that I added some random variable data - for instance, some locations have 1 or 2 pizzas.  This actually creates a funky dataset - with many points per cell, but it worked for display purposes.


<source lang="python">
# vtk DataFile Version 2.0
# vtk DataFile Version 2.0
Unstructured Grid Example
Unstructured Grid Example
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1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  
1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  
1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  
1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  1 0 0  
 
</source>





Revision as of 17:41, 4 September 2009

Introduction

Particle simulations are simulations that exist at a point. An example may be electrons in a field, or water molecules in a fluid. Particle datasets can be combined with other datasets to show particle motion in a solid or liquid.

This tutorial uses a dataset named mediumVector.vtu. I will try to get it on the Kitware web site. It was made as a vtk dataset, using the format listed at the end of this tutorial. I then read it into ParaView, and used the reflect filter in the X, then Y, then Z direction. I believe I then did the same reflections again. Finally, this file was written out to disk.


Displaying particles

  • Open ParaView, and read in your dataset.
  • If you are running ParaView 3.6.0 or 3.4.0, you will want to reset the point sizes. Display tab/ Style/ Point size 2 (or 1, depending on your preference). The following picture holds about 250,000 points.


Particles 1.png


  • You may want to replace these particles with spheres or arrows, using the glyph filter. The glyph filter will depopulate your dataset to a reasonable number of items, set by the "Maximum number of points" input box. Random mode often creates better looking output, but is not useful if you animate through numerous time steps. The following picture has arrows for particles, using vectors for direction and length, and colored by temperature.


Particles 2.png


  • Another filter that is useful is the threshold filter. Using the threshold filter, a user can select only those particles that are of interest. For instance, the following picture only displays particles that have a temperature of 430 to 511 degrees. Using the clip filter, the upper half of the picture has arrow glyphs, and the lower half has the particles themselves - all colored by temperature.


Particles 3.png


  • Finally, you can make a scatter plot through the calculator. For instance, if we want to preserve the X and Y coordinates of our points, but use number of pizzas for the Z component, we would do the following:
    • Open the calculator filter.
    • Check the Coordinate Results check box.
    • Input the formula coordsX*iHat+coordsY*jHat+pizza*kHat. This creates a vector, as follows: (X,Y,pizzas)


Particles 4.png


Example data file

This data is written in to a .vtk file. Note that I have deleted a lot of the data, which will need to be recreated. Also note that I added some random variable data - for instance, some locations have 1 or 2 pizzas. This actually creates a funky dataset - with many points per cell, but it worked for display purposes.

<source lang="python">

  1. vtk DataFile Version 2.0

Unstructured Grid Example ASCII

DATASET UNSTRUCTURED_GRID POINTS 512 float 0 0 0 1 0 0 2 0 0 3 0 0 4 0 0 5 0 0 6 0 0 7 0 0 0 1 0 1 1 0 2 1 0 3 1 0 4 1 0 5 1 0 6 1 0 7 1 0 ... 0 0 1 1 0 1 2 0 1 3 0 1 4 0 1 5 0 1 6 0 1 7 0 1 0 1 1 1 1 1 2 1 1 3 1 1 4 1 1 5 1 1 6 1 1 7 1 1 ... 0 0 2 1 0 2 2 0 2 3 0 2 4 0 2 5 0 2 6 0 2 7 0 2 0 1 2 1 1 2 2 1 2 3 1 2 4 1 2 5 1 2 6 1 2 7 1 2 ... CELL_TYPES 52 1 1 ... POINT_DATA 512 SCALARS tempurature float 1 LOOKUP_TABLE default 000.0 001.0 002.0 003.0 004.0 005.0 006.0 007.0 008.0 009.0 010.0 011.0 012.0 013.0 014.0 015.0 016.0 017.0 018.0 019.0 ... SCALARS pizza float 1 LOOKUP_TABLE default 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 000.0 ... VECTORS vectors float 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 </source>



Acknowledgements

Sandia is a multiprogram laboratory operated by Sandia Corporation, a Lockheed Martin Company, for the United States Department of Energy’s National Nuclear Security Administration under contract DE-AC04-94AL85000.