ITK/Examples/Broken/Images/ConnectedThresholdImageFilter: Difference between revisions

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(Created page with "Just need to finish the visualization code. ==ConnectedThresholdImageFilter.cxx== <source lang="cpp"> #include "itkImage.h" #include "itkImageFileWriter.h" #include "itkConnecte...")
 
(Deprecated content that is moved to sphinx)
 
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Just need to finish the visualization code.
{{warning|1=The media wiki content on this page is no longer maintainedThe examples presented on the https://itk.org/Wiki/*  pages likely require ITK version 4.13 or earlier releasesIn many cases, the examples on this page no longer conform to the best practices for modern ITK versions.}}
 
==ConnectedThresholdImageFilter.cxx==
<source lang="cpp">
#include "itkImage.h"
#include "itkImageFileWriter.h"
#include "itkConnectedThresholdImageFilter.h"
#include "itkCastImageFilter.h"
 
#include <itkImageToVTKImageFilter.h>
 
#include "vtkImageViewer.h"
#include "vtkRenderWindowInteractor.h"
#include "vtkSmartPointer.h"
#include "vtkImageActor.h"
#include "vtkInteractorStyleImage.h"
#include "vtkRenderer.h"
 
typedef itk::Image< PixelType, Dimension > ImageType;
 
void CreateImage(ImageType::Pointer image);
 
int main( int argc, char *argv[])
{
  ImageType::Pointer image = ImageType::New();
  CreateImage(image);
 
  typedef itk::ConnectedThresholdImageFilter<ImageType, ImageType> ConnectedFilterType;
  ConnectedFilterType::Pointer connectedThreshold = ConnectedFilterType::New();
  float lower = 95.0;
  float upper = 105.0;
  connectedThreshold->SetLower(lower);
  connectedThreshold->SetUpper(upper);
 
  connectedThreshold->SetReplaceValue(255);
 
  // Seed 1: (25, 35)
  ImageType::IndexType seed1;
  seed1[0] = 25;
  seed1[1] = 35;
  connectedThreshold->SetSeed(seed1);
  connectedThreshold->SetInput(image);
 
  // Seed 2: (110, 120)
  ImageType::IndexType seed2;
  seed2[0] = 110;
  seed2[1] = 120;
  connectedThreshold->SetSeed(seed2);
  connectedThreshold->SetReplaceValue(150);
 
  connectedThreshold->SetInput(image);
 
  // Visualize
  typedef itk::ImageToVTKImageFilter<ImageType> ConnectorType;
  ConnectorType::Pointer connector2 = ConnectorType::New();
  connector2->SetInput(image2);
 
  vtkSmartPointer<vtkImageActor> actor2 =
    vtkSmartPointer<vtkImageActor>::New();
  actor2->SetInput(connector2->GetOutput());
 
  // Visualize joined image
  ConnectorType::Pointer addConnector = ConnectorType::New();
  addConnector->SetInput(addFilter->GetOutput());
 
  vtkSmartPointer<vtkImageActor> addActor =
    vtkSmartPointer<vtkImageActor>::New();
  addActor->SetInput(addConnector->GetOutput());
 
  // There will be one render window
  vtkSmartPointer<vtkRenderWindow> renderWindow =
    vtkSmartPointer<vtkRenderWindow>::New();
  renderWindow->SetSize(900, 300);
 
  vtkSmartPointer<vtkRenderWindowInteractor> interactor =
    vtkSmartPointer<vtkRenderWindowInteractor>::New();
  interactor->SetRenderWindow(renderWindow);
 
  // Define viewport ranges
  // (xmin, ymin, xmax, ymax)
  double leftViewport[4] = {0.0, 0.0, 0.33, 1.0};
  double centerViewport[4] = {0.33, 0.0, 0.66, 1.0};
  double rightViewport[4] = {0.66, 0.0, 1.0, 1.0};
 
  // Setup both renderers
  vtkSmartPointer<vtkRenderer> leftRenderer =
    vtkSmartPointer<vtkRenderer>::New();
  renderWindow->AddRenderer(leftRenderer);
  leftRenderer->SetViewport(leftViewport);
  leftRenderer->SetBackground(.6, .5, .4);
 
  vtkSmartPointer<vtkRenderer> centerRenderer =
    vtkSmartPointer<vtkRenderer>::New();
  renderWindow->AddRenderer(centerRenderer);
  centerRenderer->SetViewport(centerViewport);
  centerRenderer->SetBackground(.4, .5, .6);
 
  vtkSmartPointer<vtkRenderer> rightRenderer =
    vtkSmartPointer<vtkRenderer>::New();
   renderWindow->AddRenderer(rightRenderer);
  rightRenderer->SetViewport(rightViewport);
  rightRenderer->SetBackground(.4, .5, .6);
 
  // Add the sphere to the left and the cube to the right
  leftRenderer->AddActor(actor1);
  centerRenderer->AddActor(actor2);
  rightRenderer->AddActor(addActor);
 
  leftRenderer->ResetCamera();
  centerRenderer->ResetCamera();
  rightRenderer->ResetCamera();
 
  renderWindow->Render();
 
  vtkSmartPointer<vtkInteractorStyleImage> style =
    vtkSmartPointer<vtkInteractorStyleImage>::New();
  interactor->SetInteractorStyle(style);
 
  interactor->Start();
 
 
  return EXIT_SUCCESS;
}
 
void CreateImage(ImageType::Pointer image)
{
  // Create an image with 2 connected components
  ImageType::RegionType region;
  ImageType::IndexType start;
  start[0] = 0;
  start[1] = 0;
 
  ImageType::SizeType size;
  size[0] = 200;
  size[1] = 300;
 
  region.SetSize( size);
  region.SetIndex(start);
 
  image->SetRegions(region);
  image->Allocate();
 
  // Make a square
  for(unsigned int r = 20; r < 80; r++)
    {
    for(unsigned int c = 30; c < 100; c++)
      {
      ImageType::IndexType pixelIndex;
      pixelIndex[0] = r;
      pixelIndex[1] = c;
 
      image->SetPixel(pixelIndex, 100.0);
      }
    }
 
  // Make another square
  for(unsigned int r = 100; r < 130; r++)
    {
    for(unsigned int c = 115; c < 160; c++)
      {
      ImageType::IndexType pixelIndex;
      pixelIndex[0] = r;
      pixelIndex[1] = c;
 
      image->SetPixel(pixelIndex, 100.0);
      }
    }
}
</source>
 
==CMakeLists.txt==
<source lang="cmake">
cmake_minimum_required(VERSION 2.6)
 
PROJECT(ConnectedThresholdImageFilter)
 
include_directories(/home/doriad/src/ITK/Wrapping/WrapITK/ExternalProjects/ItkVtkGlue/src/)
 
FIND_PACKAGE(VTK REQUIRED)
INCLUDE(${VTK_USE_FILE})
 
FIND_PACKAGE(ITK REQUIRED)
INCLUDE(${ITK_USE_FILE})
 
ADD_EXECUTABLE(ConnectedThresholdImageFilter ConnectedThresholdImageFilter.cxx)
TARGET_LINK_LIBRARIES(ConnectedThresholdImageFilter
ITKIO
)
 
 
</source>

Latest revision as of 21:12, 7 June 2019

Warning: The media wiki content on this page is no longer maintained. The examples presented on the https://itk.org/Wiki/* pages likely require ITK version 4.13 or earlier releases. In many cases, the examples on this page no longer conform to the best practices for modern ITK versions.