Difference between revisions of "ITK/Examples"

From KitwarePublic
< ITK
Jump to navigationJump to search
(Deprecated content that is moved to sphinx)
(Outdated examples)
 
(17 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{warning|1=The media wiki content on this page is no longer maintained.  The examples presented on the https://itk.org/Wiki/*  pages likely require ITK version 4.13 or earlier releases.  In many cases, the examples on this page no longer conform to the best practices for modern ITK versions.
 
{{warning|1=The media wiki content on this page is no longer maintained.  The examples presented on the https://itk.org/Wiki/*  pages likely require ITK version 4.13 or earlier releases.  In many cases, the examples on this page no longer conform to the best practices for modern ITK versions.
  
Recent examples that are up to date with ITK version 5 can be found at [https://itk.org/ITKExamples ITK Examples]}}
+
Recent examples that are up to date with ITK version 5 can be found at [https://itk.org/ITKExamples ITK Examples]}}
 
 
==CMake Techniques==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/CMake/CheckForModule | Check if a specific module is present]] || ||
 
|-
 
| [[ITK/Examples/CMake/CheckForITK4 | Check for ITK4]] || ||
 
|}
 
 
 
==Visualization==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Visualization/QuickView | Display an image]] || || QuickView
 
|}
 
 
 
==Input/Output (IO)==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/IO/ImageToVTKImageFilter | Display an ITK image]] || {{ITKDoxygenURL|ImageToVTKImageFilter}} ||
 
|-
 
| [[ITK/Examples/IO/VolumeFromSlices | Create a 3D volume from a series of 2D images]] || {{ITKDoxygenURL|ImageSeriesReader}} || Uses NumericSeriesFileNames to generate a list of file names
 
|}
 
 
 
==Spectral Analysis==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/SpectralAnalysis/VnlFFTRealToComplexConjugateImageFilter | Compute the FFT of an image]] || {{ITKDoxygenURL|VnlFFTRealToComplexConjugateImageFilter}} ||
 
|-
 
| [[ITK/Examples/SpectralAnalysis/CrossCorrelationInFourierDomain | Compute the cross-correlation of two images in the Fourier domain]] || {{ITKDoxygenURL|VnlFFTRealToComplexConjugateImageFilter}}{{ITKDoxygenURL|VnlFFTComplexConjugateToRealImageFilter}} || 
 
|}
 
 
 
==Statistics==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Statistics/ImageToHistogramFilterRGB | Compute a histogram from an RGB image.]] || {{ITKDoxygenURL|ImageToHistogramFilterRGB}} ||
 
|-
 
| [[ITK/Examples/Statistics/HistogramToImageFilterVectorImage | Compute a histogram from a itk::VectorImage.]] || {{ITKDoxygenURL|ImageToHistogramFilterVectorImage}} ||
 
|-
 
| [[ITK/Examples/Statistics/KdTreeBasedKMeansClustering_1D | 1D KMeans Clustering]] || {{ITKDoxygenURL|KdTreeBasedKMeansClustering}} ||
 
|-
 
| [[ITK/Examples/Statistics/KdTreeBasedKMeansClustering_3D | 3D KMeans Clustering]] || {{ITKDoxygenURL|KdTreeBasedKMeansClustering}} ||
 
|-
 
| [[ITK/Examples/Statistics/KdTreeBasedKmeansEstimator | Compute kmeans clusters]] || {{ITKDoxygenURL|KdTreeBasedKmeansEstimator}} ||
 
|-
 
| [[ITK/Examples/Statistics/TextureFeatures | Extract texture features using GLCM]] || {{ITKDoxygenURL|ScalarImageToCooccurrenceMatrixFilter}} ||
 
|}
 
 
 
==Spatial Objects==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/SpatialObjects/PlaneSpatialObject| Plane spatial object]] || {{ITKDoxygenURL|PlaneSpatialObject}} ||
 
|}
 
 
 
==Inspection==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Inspection/PixelInspection | Printing a pixel value to the console]] || [http://www.itk.org/Doxygen/html/classitk_1_1Image.html#ad424c945604f339130b4ffe81b99738eGetPixel GetPixel] ||
 
|}
 
 
 
==Image Registration==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Registration/DeformationFieldTransform | Register one image to another using manually specified landmarks ]] || {{ITKDoxygenURL|DeformationFieldTransform}} ||
 
|}
 
 
 
==Image Segmentation==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Segmentation/MeanShiftClustering | Mean shift clustering]] || {{ITKDoxygenURL|SampleMeanShiftClusteringFilter}} ||
 
 
 
|}
 
 
 
==Meshes==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Meshes/LoopTriangleCellSubdivision | Subdivide an itk::QuadEdgeMesh]] || {{ITKDoxygenURL|LoopTriangleCellSubdivisionQuadEdgeMeshFilter}} || Perform a loop triangle cell subdivision on a spherical quad edge mesh.
 
|}
 
 
 
==Wish List==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/WishList/VectorImages/VectorImageResampleImageFilter | Resample an itk::VectorImage]] ||  ||
 
|-
 
| [[ITK/Examples/WishList/Statistics/MaskedImageToHistogramFilter | Compute the histogram of a masked region of an image]] || {{ITKDoxygenURL|MaskedImageToHistogramFilter}} ||
 
|-
 
| [[ITK/Examples/WishList/PointSet/BSplineScatteredDataPointSetToImageFilter | Fit a spline to a point set]] || {{ITKDoxygenURL|BSplineScatteredDataPointSetToImageFilter}} ||
 
|-
 
| [[ITK/Examples/WishList/Morphology/BinaryPruningImageFilter | BinaryPruningImageFilter]] || {{ITKDoxygenURL|BinaryPruningImageFilter}} ||
 
|-
 
| [[ITK/Examples/Broken/Statistics/GaussianMixtureModelComponent | Compute distributions of image pixels using GMM EM]] || {{ITKDoxygenURL|GaussianMixtureModelComponent}} ||
 
|-
 
| [[ITK/Examples/WishList/LevenbergMarquart| LevenbergMarquart]] || ||
 
|-
 
| [[ITK/Examples/WishList/IterativeClosestPoints| IterativeClosestPoints]] || ||
 
|-
 
| [[ITK/Examples/WishList/Operators/AllOperators| Demonstrate all operators]] || {{ITKDoxygenURL|NeighborhoodOperator}}  ||
 
|-
 
| [[ITK/Examples/WishList/ImageProcessing/ColorNormalizedCorrelation| Color Normalized Correlation]] || {{ITKDoxygenURL|NormalizedCorrelationImageFilter}}  ||
 
|-
 
| [[ITK/Examples/WishList/SpatialObjects/ContourSpatialObject| ContourSpatialObject]] || {{ITKDoxygenURL|ContourSpatialObject}}  ||
 
|-
 
| [[ITK/Examples/Broken/SimpleOperations/MetaDataDictionary| Store non-pixel associated data in an image]] || {{ITKDoxygenURL|MetaDataDictionary}} ||
 
|-
 
| [[ITK/Examples/Segmentation/LevelSets| Level Sets]] || ||
 
|-
 
| [[ITK/Examples/Segmentation//RegionGrowing| Region Growing]] || ||
 
|-
 
| [[ITK/Examples/Segmentation/OtsuThresholdImageFilter| Separate foreground and background using Otsu's method]] || {{ITKDoxygenURL|OtsuThresholdImageFilter}} ||
 
|-
 
| [[ITK/Examples/Segmentation/SimpleContourExtractorImageFilter| Extract contours from an image]] || {{ITKDoxygenURL|SimpleContourExtractorImageFilter}} ||
 
|-
 
| [[ITK/Examples/Conversions/RGBToVectorImageAdaptor| Present an image of RGBPixel pixels as an image of vectors]] || {{ITKDoxygenURL|RGBToVectorImageAdaptor}} ||
 
|-
 
| [[ITK/Examples/Conversions/HoughTransform2DCirclesImageFilter| HoughTransform2DCirclesImageFilter]] || {{ITKDoxygenURL|HoughTransform2DCirclesImageFilter}} ||
 
|-
 
| [[ITK/Examples/Conversions/HoughTransform2DLinesImageFilter| HoughTransform2DLinesImageFilter]] || {{ITKDoxygenURL|HoughTransform2DLinesImageFilter}} ||
 
|-
 
| [[ITK/Examples/Matlab/MatlabToITK| Write data from Matlab in a format readable by ITK]] || ||
 
|-
 
| [[ITK/Examples/Matlab/ITKToMatlab| Write data from ITK in a format readable by Matlab]] || ||
 
|-
 
| [[ITK/Examples/WishList/ImageProcessing/EdgePotentialImageFilter| Compute edge potential]] ||{{ITKDoxygenURL|EdgePotentialImageFilter}} ||
 
|}
 
 
 
==Included in the ITK Repository==
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Included/Registration| Image registration]] || ||
 
|}
 
 
 
==Problems==
 
===Small Problems===
 
{{ITKExamplesTable}}
 
|-
 
| [[ITK/Examples/Broken/Statistics/ImageToHistogramFilter | Compute the histogram of an image]] || {{ITKDoxygenURL|Statistics_1_1ImageToHistogramFilter}} || The last entry of the red histogram should contain several values, but it is 0?
 
|-
 
| [[ITK/Examples/Broken/Statistics/KmeansModelEstimator | Classifying pixels using KMeans]] || {{ITKDoxygenURL|KmeansModelEstimator}} || How to apply the labels of the filter to the input image?
 
|}
 

Latest revision as of 19:04, 7 June 2019

Warning: The media wiki content on this page is no longer maintained. The examples presented on the https://itk.org/Wiki/* pages likely require ITK version 4.13 or earlier releases. In many cases, the examples on this page no longer conform to the best practices for modern ITK versions. Recent examples that are up to date with ITK version 5 can be found at ITK Examples