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ID | Project | Category | View Status | Date Submitted | Last Update | ||||
0014539 | ParaView | (No Category) | public | 2014-01-23 21:54 | 2015-02-18 19:16 | ||||
Reporter | Alan Scott | ||||||||
Assigned To | Dan Lipsa | ||||||||
Priority | urgent | Severity | minor | Reproducibility | have not tried | ||||
Status | closed | Resolution | fixed | ||||||
Platform | OS | OS Version | |||||||
Product Version | 4.1 | ||||||||
Target Version | 4.4 | Fixed in Version | 4.3 | ||||||
Summary | 0014539: Save data crashes - windows | ||||||||
Description | 4.1 (repackaged from Kitware binaries), Windows, local server. * Open can.exo. All variables on. Apply. * Clip. Apply. (It seemed to work if not clipping). * Save Data. Save as exodus. All timesteps. This will crash | ||||||||
Additional Information | The test loads the can.ex2 (which is a time dependent dataset), applies a Clip filter and then saves the data in ExodusII format. The reason this test fails is that individual time steps resulting from the Clip filter have changing number of points and cells as well as changing types of cells. The code and (my reading of) Exodus II format seems to support this scenario however I have fixed several issues with the code which suggests the scenario is not a common one (or it was just not tested). Now, the code writes this data without warnings or segfaults, but there are problems when reading the data. We added an error message when saving temporal data that has changing number of cells/points between time steps. Then, if we need to, we can go back and make the writer/reader work in those cases as well. | ||||||||
Tags | No tags attached. | ||||||||
Project | Sandia | ||||||||
Topic Name | 14539-can-crash | ||||||||
Type | crash | ||||||||
Attached Files | |||||||||
Relationships | |
Relationships |
Notes | |
(0032210) Alan Scott (manager) 2014-01-23 21:57 |
Also happens on Linux, my build. Linux was release, but still gave me a function level stack trace. Here it is. *** glibc detected *** /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/paraview: double free or corruption (!prev): 0x0000000004c8a290 *** ======= Backtrace: ========= /lib64/libc.so.6[0x38654760e6] /lib64/libc.so.6[0x3865478c13] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkIOExodus-pv4.1.so.1(_ZN17vtkExodusIIWriter21WriteBlockInformationEv+0xb00)[0x7fce98e1cce0] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkIOExodus-pv4.1.so.1(_ZN17vtkExodusIIWriter9WriteDataEv+0x9ec)[0x7fce98e1f64c] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkIOExodus-pv4.1.so.1(_ZN17vtkExodusIIWriter11RequestDataEP14vtkInformationPP20vtkInformationVectorS3_+0x7b)[0x7fce98e16f2b] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN12vtkExecutive13CallAlgorithmEP14vtkInformationiPP20vtkInformationVectorS3_+0x54)[0x7fce8d8f7234] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x4c)[0x7fce8d8f3aec] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x79)[0x7fce8d8f2169] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x219)[0x7fce8d8f5db9] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x3a1)[0x7fce8d90cb91] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x1df)[0x7fce8d8f586f] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0x95)[0x7fce8d90f095] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x64)[0x7fce8d8f3b04] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x79)[0x7fce8d8f2169] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x219)[0x7fce8d8f5db9] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x3a1)[0x7fce8d90cb91] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x1df)[0x7fce8d8f586f] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0x95)[0x7fce8d90f095] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x64)[0x7fce8d8f3b04] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x79)[0x7fce8d8f2169] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x219)[0x7fce8d8f5db9] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x3a1)[0x7fce8d90cb91] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x1df)[0x7fce8d8f586f] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0x95)[0x7fce8d90f095] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x64)[0x7fce8d8f3b04] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x79)[0x7fce8d8f2169] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x219)[0x7fce8d8f5db9] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x3a1)[0x7fce8d90cb91] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x1df)[0x7fce8d8f586f] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0x95)[0x7fce8d90f095] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x64)[0x7fce8d8f3b04] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN24vtkCompositeDataPipeline11ExecuteDataEP14vtkInformationPP20vtkInformationVectorS3_+0x79)[0x7fce8d8f2169] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x219)[0x7fce8d8f5db9] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline14ProcessRequestEP14vtkInformationPP20vtkInformationVectorS3_+0x3a1)[0x7fce8d90cb91] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN23vtkDemandDrivenPipeline10UpdateDataEi+0x1df)[0x7fce8d8f586f] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkCommonExecutionModel-pv4.1.so.1(_ZN32vtkStreamingDemandDrivenPipeline6UpdateEi+0x95)[0x7fce8d90f095] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkIOCore-pv4.1.so.1(_ZN9vtkWriter5WriteEv+0x39)[0x7fce8f4975a9] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerManagerApplication-pv4.1.so.1(_Z16vtkWriterCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0x40f)[0x7fce9bc7e98f] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x14c)[0x7fce96a9d76c] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerManagerApplication-pv4.1.so.1(_Z24vtkExodusIIWriterCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0xbd0)[0x7fce9bf21680] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x14c)[0x7fce96a9d76c] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerManagerApplication-pv4.1.so.1(_Z25vtkPExodusIIWriterCommandP26vtkClientServerInterpreterP13vtkObjectBasePKcRK21vtkClientServerStreamRS5_Pv+0x41b)[0x7fce9bf7744b] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter19CallCommandFunctionEPKcP13vtkObjectBaseS1_RK21vtkClientServerStreamRS4_+0x14c)[0x7fce96a9d76c] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter20ProcessCommandInvokeERK21vtkClientServerStreami+0x192)[0x7fce96aa11d2] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter17ProcessOneMessageERK21vtkClientServerStreami+0x28e)[0x7fce96aa082e] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkClientServer-pv4.1.so.1(_ZN26vtkClientServerInterpreter13ProcessStreamERK21vtkClientServerStream+0x1d)[0x7fce96aa091d] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkPVSessionCore21ExecuteStreamInternalERK21vtkClientServerStreamb+0x10c)[0x7fce9a1e722c] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkPVSessionCore13ExecuteStreamEjRK21vtkClientServerStreamb+0x4c)[0x7fce9a1e3b9c] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerImplementationCore-pv4.1.so.1(_ZN16vtkPVSessionBase13ExecuteStreamEjRK21vtkClientServerStreamb+0x42)[0x7fce9a1e16e2] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkPVServerManagerCore-pv4.1.so.1(_ZN16vtkSMWriterProxy14UpdatePipelineEv+0x70)[0x7fce9a770140] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkpqApplicationComponents-pv4.1.so.1(_ZN18pqSaveDataReaction14saveActiveDataERK7QString+0x1cb)[0x7fce9df3166b] /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/libvtkpqApplicationComponents-pv4.1.so.1(_ZN18pqSaveDataReaction14saveActiveDataEv+0x2af)[0x7fce9df31c6f] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtCore.so.4(_ZN11QMetaObject8activateEP7QObjectPKS_iPPv+0x321)[0x7fce8b56fb61] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN7QAction9triggeredEb+0x32)[0x7fce8bdfd4d2] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN7QAction8activateENS_11ActionEventE+0x7b)[0x7fce8bdfe8db] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(+0x63cc69)[0x7fce8c23dc69] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(+0x64207a)[0x7fce8c24307a] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN7QWidget5eventEP6QEvent+0x74c)[0x7fce8be510fc] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN5QMenu5eventEP6QEvent+0x6b)[0x7fce8c24504b] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN19QApplicationPrivate13notify_helperEP7QObjectP6QEvent+0xac)[0x7fce8be0282c] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN12QApplication6notifyEP7QObjectP6QEvent+0x926)[0x7fce8be094b6] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtCore.so.4(_ZN16QCoreApplication14notifyInternalEP7QObjectP6QEvent+0x8c)[0x7fce8b55b3fc] /projects/viz/paraview/support/Linux-eng-sci-rhel6-x86_64/install/qt-4.8.5/lib/libQtGui.so.4(_ZN19QApplicationPrivate14sendMouseEventEP7QWidgetP11QMouseEventS1_S1_PS1_R8QPointerIS0_Eb+0x19e)[0x7fce8be07fbe] ======= Memory map: ======== 00400000-008ce000 r-xp 00000000 00:95 105448728 /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/paraview 00acd000-00acf000 rw-p 004cd000 00:95 105448728 /projects/viz/paraview/ParaView/4.1.0/Linux-eng-sci-rhel6-x86_64/lib/paraview-4.1/paraview 014c5000-05193000 rw-p 00000000 00:00 0 [heap] 326d600000-326d604000 r-xp 00000000 08:03 14942229 /lib64/libgthread-2.0.so.0.2200.5 326d604000-326d803000 ---p 00004000 08:03 14942229 /lib64/libgthread-2.0.so.0.2200.5 326d803000-326d804000 rw-p 00003000 08:03 14942229 /lib64/libgthread-2.0.so.0.2200.5 326da00000-326da40000 r-xp 00000000 08:03 14942231 /lib64/libdbus-1.so.3.4.0 326da40000-326dc3f000 ---p 00040000 08:03 14942231 /lib64/libdbus-1.so.3.4.0 326dc3f000-326dc40000 r--p 0003f000 08:03 14942231 /lib64/libdbus-1.so.3.4.0 326dc40000-326dc41000 rw-p 00040000 08:03 14942231 /lib64/libdbus-1.so.3.4.0 326e200000-326e25e000 r-xp 00000000 08:03 6034398 /usr/lib64/libORBit-2.so.0.1.0 326e25e000-326e45d000 ---p 0005e000 08:03 6034398 /usr/lib64/libORBit-2.so.0.1.0 326e45d000-326e470000 rw-p 0005d000 08:03 6034398 /usr/lib64/libORBit-2.so.0.1.0 326e600000-326e63b000 r-xp 00000000 08:03 6042639 /usr/lib64/libgconf-2.so.4.1.5 326e63b000-326e83a000 ---p 0003b000 08:03 6042639 /usr/lib64/libgconf-2.so.4.1.5 326e83a000-326e83f000 rw-p 0003a000 08:03 6042639 /usr/lib64/libgconf-2.so.4.1.5 3271800000-327187e000 r-xp 00000000 08:03 6042826 /usr/lib64/libGLU.so.1.3.1 327187e000-3271a7e000 ---p 0007e000 08:03 6042826 /usr/lib64/libGLU.so.1.3.1Abort (core dumped) |
(0032346) Dan Lipsa (developer) 2014-02-18 10:05 |
Paraview commit: ================ commit aa76fba11fa769f9568054ce1feec9c4e29a8df0 Author: Dan Lipsa <dan.lipsa@kitware.com> Date: Mon Feb 17 09:55:20 2014 -0500 Update link to VTK to fix Exodus II Writer crash with clipped can. Change-Id: I1e0715b21cb630b1c51743ef49b7a48b44b6fb6f VTK commit: ============ commit b604c23bd2c08f5ee09cbc15c149fc9edf0aa16f Author: Dan Lipsa <dan.lipsa@kitware.com> Date: Mon Feb 10 16:24:46 2014 -0500 Report an error when writing a file with changing topology. If the number of points, cells or blocks change from one time step to the ne report an error. We modified the writer to suport temporal files with changing topology, however the reader does not yet supports it. Change-Id: Icf7528cf3507094658dbfa8076c670f396aa6989 |
(0032386) Utkarsh Ayachit (administrator) 2014-02-23 09:59 |
SUMMARY --------------------------------------------- Topics merged into master: 14412-select-translucent-actors 14455-save-screenshot-semicolon 14539-can-crash 14558-disconnect-cleanup (VTK) 14565-composite-queries 14585_XMLWriters_64bit_default ParallelPythonImport_mpi4py catalyst-web-improvement cleanup_CoProcessing fix-rendering-edition fix-sciberquest-installdir fix_multiview_widget pvweb-widget-catalyst |
(0032895) Alan Scott (manager) 2014-06-18 21:46 |
Local server works correctly, but ParaView dies remote server after putting out over 800 MBytes of verbiage (and still writing when I killed it). Please also stop the madness remote server. |
(0033183) Utkarsh Ayachit (administrator) 2014-08-05 13:48 |
Ben, note the crash happens on Linux too, so you don't need to try this on Windows. |
(0033189) Ben Boeckel (Kitware) (developer) 2014-08-07 15:11 |
Using pvserver, I cannot reproduce the crash. I see it error on the server and client side after 2 messages about input field data will a Null name. |
(0033317) Cory Quammen (developer) 2014-09-09 01:00 |
I can reproduce a crash on a remote server run with mpirun -np 2 bin/pvserver It prints the following warnings Warning: In /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx, line 2996 vtkPExodusIIWriter (0x466e8e0): Attempting to proceed without metadata Warning: In /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx, line 2996 vtkPExodusIIWriter (0x2f78430): Attempting to proceed without metadata Warning: In /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx, line 2996 vtkPExodusIIWriter (0x2f78430): Attempting to proceed without metadata Warning: In /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx, line 2996 vtkPExodusIIWriter (0x466e8e0): Attempting to proceed without metadata Warning: In /home/cory/code/src/ParaView/VTK/IO/ParallelExodus/vtkPExodusIIWriter.cxx, line 138 vtkPExodusIIWriter (0x2f78430): NodesPerElement associated with ID's across processors doesn't match Warning: In /home/cory/code/src/ParaView/VTK/IO/ParallelExodus/vtkPExodusIIWriter.cxx, line 138 vtkPExodusIIWriter (0x2f78430): NodesPerElement associated with ID's across processors doesn't match Warning: In /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx, line 952 vtkPExodusIIWriter (0x466e8e0): Array in input field data has Null name, cannot output it Warning: In /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx, line 952 vtkPExodusIIWriter (0x466e8e0): Array in input field data has Null name, cannot output it |
(0033318) Cory Quammen (developer) 2014-09-09 01:15 |
Running pvserver through mpirun with -np 2 and attaching gdb, the crash occurs here: Program received signal SIGSEGV, Segmentation fault. vtkExodusIIWriter::WriteBlockInformation (this=0x3d56b00) at /home/cory/code/src/ParaView/VTK/IO/Exodus/vtkExodusIIWriter.cxx:1584 1584 + blockIter->second.EntityCounts[numElts - 1]; |
(0033320) Dan Lipsa (developer) 2014-09-10 13:35 |
When running the test in parallel, you can get the crash without using the Clip filter. So, the ExodusII writer does not work at all in parallel (the crash happens at time step 0, my test for changing topology is hit at time step 4 for the built-in server). I would say this is a different bug. :-) |
(0033982) Dan Lipsa (developer) 2014-12-17 13:54 |
commit b45e6b633813ebf7d3948846145b72c61265604c Author: Dan Lipsa <dan.lipsa@kitware.com> Date: Wed Dec 17 11:35:23 2014 -0500 Stop all processes if one process stops. If running in parallel and saving multiple time steps, if one process stops executing all processes stop. Change-Id: I1fee5599a1acaad230235db421961f602a3e342e commit 699deb914c893e5ad8412913452358e1f439e6b4 Author: Dan Lipsa <dan.lipsa@kitware.com> Date: Fri Dec 12 15:28:54 2014 -0500 BUG: Writing an Exodus file in parallel segfaults. This happens when data is only on a node. Change-Id: Id03fb63e46593f2e9ca24180c6091dace64df7f5 |
(0033993) Utkarsh Ayachit (administrator) 2014-12-22 14:16 |
commit 5b2444bd4fdcf4b9a0a5201cdb95f36609cf4a9b Author: Utkarsh Ayachit <utkarsh.ayachit@kitware.com> Date: Mon Dec 22 14:16:14 2014 -0500 Update VTK. Change-Id: Ib0e7a7631b0cc4623d538b6c15d8b33eda197012 |
(0033996) Utkarsh Ayachit (administrator) 2014-12-23 07:47 |
SUMMARY --------------------------------------------- Topics merged into master (v4.2.0-339-g3d6f539): (VTK) 14539-can-crash 15073_fix_ResetCamera 6657_add_outside_range_colors (VTK) KW00001499_ColorByFieldData add_cgns_plugin_test camera-9503 cfapi-null-logic (VTK) exodus-15127 fix-dashboard-warning h5part-15215 mangle-pvbatch-test-names (VTK) opengl2_updates pvweb-support-multiple-data-directories revert-cfapi-deprecation-fixes support_custom_link_path_setting update-catalyst-20141215 webvisualizer-add-tooltips |
(0034258) Alan Scott (manager) 2015-02-18 19:16 |
Excellent, didn't crash. Gave a warning. Tested remote server, Linux, master. Also tested Windows, local server, Kitware nightly. |
Notes |
Issue History | |||
Date Modified | Username | Field | Change |
2014-01-23 21:54 | Alan Scott | New Issue | |
2014-01-23 21:57 | Alan Scott | Note Added: 0032210 | |
2014-01-28 08:20 | Utkarsh Ayachit | Assigned To | => Dan Lipsa |
2014-01-29 11:33 | Dan Lipsa | Status | backlog => active development |
2014-02-18 10:05 | Dan Lipsa | Topic Name | => 14539-can-crash |
2014-02-18 10:05 | Dan Lipsa | Note Added: 0032346 | |
2014-02-18 10:05 | Dan Lipsa | Status | active development => gatekeeper review |
2014-02-18 10:05 | Dan Lipsa | Resolution | open => fixed |
2014-02-18 10:05 | Dan Lipsa | Additional Information Updated | |
2014-02-23 09:58 | Utkarsh Ayachit | Fixed in Version | => git-master |
2014-02-23 09:59 | Utkarsh Ayachit | Status | gatekeeper review => customer review |
2014-02-23 09:59 | Utkarsh Ayachit | Note Added: 0032386 | |
2014-06-17 09:22 | Utkarsh Ayachit | Target Version | => 4.2 |
2014-06-18 21:46 | Alan Scott | Note Added: 0032895 | |
2014-06-18 21:46 | Alan Scott | Status | customer review => active development |
2014-07-30 16:22 | Utkarsh Ayachit | Assigned To | Dan Lipsa => |
2014-07-31 13:06 | Utkarsh Ayachit | Assigned To | => Utkarsh Ayachit |
2014-07-31 13:06 | Utkarsh Ayachit | Status | active development => todo |
2014-08-05 13:48 | Utkarsh Ayachit | Assigned To | Utkarsh Ayachit => Ben Boeckel (Kitware) |
2014-08-05 13:48 | Utkarsh Ayachit | Note Added: 0033183 | |
2014-08-07 15:11 | Ben Boeckel (Kitware) | Note Added: 0033189 | |
2014-08-18 11:11 | Utkarsh Ayachit | Assigned To | Ben Boeckel (Kitware) => Cory Quammen |
2014-08-18 11:56 | Utkarsh Ayachit | Assigned To | Cory Quammen => Ben Boeckel (Kitware) |
2014-08-29 10:59 | Utkarsh Ayachit | Fixed in Version | git-master => 4.2 |
2014-09-07 14:43 | Utkarsh Ayachit | Assigned To | Ben Boeckel (Kitware) => Dan Lipsa |
2014-09-09 01:00 | Cory Quammen | Note Added: 0033317 | |
2014-09-09 01:15 | Cory Quammen | Note Added: 0033318 | |
2014-09-10 08:00 | Dan Lipsa | Status | todo => active development |
2014-09-10 13:35 | Dan Lipsa | Note Added: 0033320 | |
2014-09-10 13:36 | Dan Lipsa | Status | active development => todo |
2014-11-14 22:52 | Utkarsh Ayachit | Target Version | 4.2 => 4.4 |
2014-12-10 10:52 | Dan Lipsa | Status | todo => active development |
2014-12-17 13:54 | Dan Lipsa | Note Added: 0033982 | |
2014-12-22 14:16 | Utkarsh Ayachit | Note Added: 0033993 | |
2014-12-22 14:16 | Utkarsh Ayachit | Status | active development => gatekeeper review |
2014-12-23 07:47 | Utkarsh Ayachit | Fixed in Version | 4.2 => git-master |
2014-12-23 07:47 | Utkarsh Ayachit | Status | gatekeeper review => customer review |
2014-12-23 07:47 | Utkarsh Ayachit | Note Added: 0033996 | |
2015-01-02 10:43 | Utkarsh Ayachit | Fixed in Version | git-master => 4.3 |
2015-02-18 19:16 | Alan Scott | Note Added: 0034258 | |
2015-02-18 19:16 | Alan Scott | Status | customer review => closed |
Issue History |
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