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IDProjectCategoryView StatusDate SubmittedLast Update
0014444ParaView(No Category)public2013-12-05 13:252014-08-29 11:00
ReporterNathan Fabian 
Assigned ToNathan Fabian 
PrioritynormalSeverityminorReproducibilityhave not tried
StatusclosedResolutionfixed 
PlatformOSOS Version
Product Versiongit-master 
Target Version4.2Fixed in Version4.2 
Summary0014444: implement new fragment analysis
Descriptionextend the AMRContour filter with two new filters to do connectivity and integration, closer mimic the Material Interaface Filter.
TagsNo tags attached.
ProjectSandia
Topic Namefix_parallel_amrconnectivity, implement_new_fragment_analysis
Typeincorrect functionality
Attached Files

 Relationships

  Notes
(0031916)
Sebastien Jourdain (manager)
2013-12-08 13:34

 This branch has been reverted from next due to some Windows issue.

Please push again with a fix for Windows
(0032031)
Nathan Fabian (developer)
2013-12-19 13:28

 Adding fix_parallel_amrconnectivity branch since implement_new_fragment_analysis is already merged.
(0032039)
Utkarsh Ayachit (administrator)
2013-12-20 08:26

 Topics merged into master:
        14286_fix_orientation_widget
(VTK) 14426-huge-png
        14464_fix_specular_highlights
        14466_fix_calculator_panel
        disable-unified-bindings-by-default
        fix-collaboration
        fix_parallel_amrconnectivity
        gio-cleanup-and-warning-fixes
        pvweb-enhancements-events-protocols-docs
(0032051)
Alan Scott (manager)
2013-12-24 16:22

 Wrote an e-mail to Nathan, asking how to test.
(0032132)
Nathan Fabian (developer)
2014-01-06 12:37

 To test basic functionality, there are two new filters under Filters->CTH, "AMR Connectivity" and "AMR Fragment Integration" Load an AMR spyplot file and bring in at least one Volume Fraction and one corresponding Mass array. Execute the AMR Connectivity on that volume fraction. Then execute the AMR Fragment Integration on the result using both the volume fraction and mass array. You should get a spreadsheet of the fragments with their mass and volume.

Known issue: AMR Connectivity doesn't correctly display the region ID produced by AMR connectivity. It relies on values in the ghost cells, so I'll need to add an option to produce region ID in the ghosts.

Unknown issue: Not sure if it scales well or not yet.
(0032139)
Alan Scott (manager)
2014-01-07 16:06

 This hangs when running Dave's small cth dataset. (Ask me for it - Utkarsh should also have it).
Remote server, 8 servers.
Open dataset. All variables on.
AMR Connectivity filter, Material Volume 1, apply.

Never returns (but doesn't crash).
(0032203)
Nathan Fabian (developer)
2014-01-21 18:43

 Okay, I found it. I've pushed to next and will mark this when the dashboards come clean.
(0032204)
Nathan Fabian (developer)
2014-01-21 19:32

 It looks like the dashboard is clean.
(0032235)
Nathan Fabian (developer)
2014-01-29 18:33

 Found an additional problem, working it out.
(0032285)
Nathan Fabian (developer)
2014-02-05 14:14

 I believe this is finally resolved for various core counts.
(0032302)
Utkarsh Ayachit (administrator)
2014-02-07 08:09

 SUMMARY
---------------------------------------------
Topics merged into master:
        14498-crash-delete-value
        14540_fix_disappearing_columns
        14544_temporal_xdmf
        14545_parallel_python_import_paraview.simple
        add-paraview-config
        add-rendering-base-edition
        catalyst-web-metadata-add-on
        fix-catalyst-script
        fix_parallel_amrconnectivity
        make_subclassing_easier
        view-settings


---------------------------------------------
Topics reverted from next:
  visit-bridge-update-2.7.0
  visit-bridge-update-2.7.0-revert
(0032377)
Alan Scott (manager)
2014-02-21 20:33

 I don't understand this filter set, thus will meet with Nathan next week. He can show me how it works.
(0032418)
Alan Scott (manager)
2014-02-26 22:16

 Talked this one over with Nathan, and we agreed to push it back. To resolve this bug, we need two things:
* Nathan said there is a bug where this filter doesn't work correctly at scale.
* We need how to run and test this bug documented somewhere, preferably the wiki page.
(0032534)
Nathan Fabian (developer)
2014-03-25 12:30

 It looks like this new model is working correctly. It scales okay, but needs improvement, however it should be functional.

Additionally, here's a wiki page with the explanation: http://paraview.org/Wiki/ParaView/Catalyst/AMRFragments [^]
(0032897)
Alan Scott (manager)
2014-06-18 22:02

 Needs to be tested at huge scale, which Nathan is doing. Trusting Nathan - closing untested.

 Issue History
Date Modified Username Field Change
2013-12-05 13:25 Nathan Fabian New Issue
2013-12-05 13:25 Nathan Fabian Assigned To => Nathan Fabian
2013-12-05 13:51 Nathan Fabian Topic Name => implement_new_fragment_analysis
2013-12-05 13:51 Nathan Fabian Status backlog => gatekeeper review
2013-12-05 13:51 Nathan Fabian Resolution open => fixed
2013-12-08 13:34 Sebastien Jourdain Note Added: 0031916
2013-12-08 13:34 Sebastien Jourdain Status gatekeeper review => active development
2013-12-19 13:28 Nathan Fabian Topic Name implement_new_fragment_analysis => fix_parallel_amrconnectivity, implement_new_fragment_analysis
2013-12-19 13:28 Nathan Fabian Note Added: 0032031
2013-12-19 13:28 Nathan Fabian Status active development => gatekeeper review
2013-12-20 08:26 Utkarsh Ayachit Fixed in Version => git-master
2013-12-20 08:26 Utkarsh Ayachit Status gatekeeper review => customer review
2013-12-20 08:26 Utkarsh Ayachit Note Added: 0032039
2013-12-24 16:22 Alan Scott Note Added: 0032051
2014-01-06 12:37 Nathan Fabian Note Added: 0032132
2014-01-07 16:06 Alan Scott Note Added: 0032139
2014-01-07 16:06 Alan Scott Status customer review => todo
2014-01-11 08:39 Utkarsh Ayachit Fixed in Version git-master => 4.1
2014-01-21 18:43 Nathan Fabian Note Added: 0032203
2014-01-21 19:32 Nathan Fabian Note Added: 0032204
2014-01-21 19:32 Nathan Fabian Status todo => gatekeeper review
2014-01-29 18:32 Nathan Fabian Status gatekeeper review => todo
2014-01-29 18:33 Nathan Fabian Note Added: 0032235
2014-02-05 14:14 Nathan Fabian Note Added: 0032285
2014-02-05 14:14 Nathan Fabian Status todo => gatekeeper review
2014-02-07 08:09 Utkarsh Ayachit Fixed in Version 4.1 => git-master
2014-02-07 08:09 Utkarsh Ayachit Status gatekeeper review => customer review
2014-02-07 08:09 Utkarsh Ayachit Note Added: 0032302
2014-02-21 20:33 Alan Scott Note Added: 0032377
2014-02-26 22:16 Alan Scott Note Added: 0032418
2014-02-26 22:16 Alan Scott Status customer review => backlog
2014-02-26 22:16 Alan Scott Resolution fixed => reopened
2014-03-25 12:30 Nathan Fabian Note Added: 0032534
2014-03-25 12:30 Nathan Fabian Status backlog => gatekeeper review
2014-03-25 12:30 Nathan Fabian Resolution reopened => fixed
2014-03-28 11:54 Utkarsh Ayachit Status gatekeeper review => customer review
2014-06-17 09:22 Utkarsh Ayachit Target Version => 4.2
2014-06-18 21:56 Alan Scott Project TBD => Sandia
2014-06-18 22:02 Alan Scott Note Added: 0032897
2014-06-18 22:02 Alan Scott Status customer review => closed
2014-08-29 11:00 Utkarsh Ayachit Fixed in Version git-master => 4.2

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