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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||
| 0012649 | ParaView | (No Category) | public | 2011-10-12 19:15 | 2012-10-29 17:04 | ||||
| Reporter | Alan Scott | ||||||||
| Assigned To | George Zagaris | ||||||||
| Priority | urgent | Severity | minor | Reproducibility | have not tried | ||||
| Status | closed | Resolution | fixed | ||||||
| Platform | OS | OS Version | |||||||
| Product Version | 3.12 | ||||||||
| Target Version | Fixed in Version | 3.98.0 | |||||||
| Summary | 0012649: AMR contour seg faults remote server | ||||||||
| Description | ParaView 3.12.0-rc2. Remote server. Linux. Open dave's small AMR CTH dataset. All vars turned on. Apply. Filters/ AMR Contour. Select material volume fraction 1. Apply. Seg fault. | ||||||||
| Tags | No tags attached. | ||||||||
| Project | Sandia | ||||||||
| Topic Name | |||||||||
| Type | crash | ||||||||
| Attached Files | |||||||||
| Relationships | |
| Relationships |
| Notes | |
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(0027574) David Partyka (developer) 2011-10-13 15:56 |
In my case I get the following error instead of a segfault. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 766 vtkSocketCommunicator (0x2e7b970): Could not receive tag. 188969 ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 766 vtkSocketCommunicator (0x2e7b970): Could not receive tag. 55627 ERROR: In /home/partyd/Projects/ParaView/source/ParaViewCore/ServerManager/vtkSMSessionClient.cxx, line 649 vtkSMSessionClient (0x326ac60): Server failed to gather information. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 766 vtkSocketCommunicator (0x2e7b970): Could not receive tag. 188969 ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Common/vtkSocket.cxx, line 572 vtkClientSocket (0x2e7a0f0): Socket error in call to send. Broken pipe. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 716 vtkSocketCommunicator (0x2e7b970): Could not send tag. ERROR: In /home/partyd/Projects/ParaView/source/VTK/Parallel/vtkSocketCommunicator.cxx, line 766 vtkSocketCommunicator (0x2e7b970): Could not receive tag. 188969 |
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(0027577) David Partyka (developer) 2011-10-14 13:34 |
And on the server I am getting this. (So forgot to include this yesterday). partyd@lanfear64:~/Projects/ParaView/build$ mpiexec -np 8 ./bin/pvserver Waiting for client Connection URL: cs://localhost:11111 Client connected. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. pvserver: /home/partyd/Projects/ParaView/source/VTK/Filtering/vtkHierarchicalBoxDataSet.cxx:504: int vtkHierarchicalBoxDataSet::GetMetaData(unsigned int, unsigned int, vtkAMRBox&): Assertion `"Expected Meta-data" && info->Has( BOX_DIMENSIONALITY() )' failed. rank 6 in job 6 lanfear64_57056 caused collective abort of all ranks exit status of rank 6: killed by signal 9 rank 4 in job 6 lanfear64_57056 caused collective abort of all ranks exit status of rank 4: killed by signal 9 rank 2 in job 6 lanfear64_57056 caused collective abort of all ranks exit status of rank 2: killed by signal 9 rank 1 in job 6 lanfear64_57056 caused collective abort of all ranks exit status of rank 1: killed by signal 6 partyd@lanfear64:~/Projects/ParaView/build$ |
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(0027578) George Zagaris (developer) 2011-10-14 13:54 |
Yes, it's because the AMR metadata is not distributed among processes. The AMR tree must be full on all processes with the appropriate metadata. I have a utilitity -- See vtkAMRUtilities under Parallel -- that will do all the communication as well as generation of metadata, however, it expects the Berger-Colella AMR. The fact that with CTH AMR we may not have full domain coverage complicates things a bit. |
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(0028518) George Zagaris (developer) 2012-04-23 16:50 |
This should no longer be an issue. The AMR data-structures have been split to vtkOverlappingAMR which implements Berger-Collela AMR and vtkNonOverlappingAMR which is compatible with CTH. |
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(0028521) George Zagaris (developer) 2012-04-23 21:28 |
Addressed when merged in AMR-Refactoring branch |
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(0028561) Alan Scott (manager) 2012-04-30 21:57 |
Tested remote server, Linux, master. |
| Notes |
| Issue History | |||
| Date Modified | Username | Field | Change |
| 2011-10-12 19:15 | Alan Scott | New Issue | |
| 2011-10-13 10:46 | Utkarsh Ayachit | Assigned To | => George Zagaris |
| 2011-10-13 15:56 | David Partyka | Note Added: 0027574 | |
| 2011-10-14 13:34 | David Partyka | Note Added: 0027577 | |
| 2011-10-14 13:54 | George Zagaris | Note Added: 0027578 | |
| 2012-04-23 16:50 | George Zagaris | Note Added: 0028518 | |
| 2012-04-23 21:28 | George Zagaris | Note Added: 0028521 | |
| 2012-04-23 21:28 | George Zagaris | Status | backlog => gatekeeper review |
| 2012-04-23 21:28 | George Zagaris | Resolution | open => fixed |
| 2012-04-24 14:09 | Utkarsh Ayachit | Status | gatekeeper review => customer review |
| 2012-04-30 21:57 | Alan Scott | Note Added: 0028561 | |
| 2012-04-30 21:57 | Alan Scott | Status | customer review => closed |
| 2012-04-30 21:57 | Alan Scott | Fixed in Version | => git-master |
| 2012-10-29 17:04 | Utkarsh Ayachit | Fixed in Version | git-master => 3.98.0 |
| Issue History |
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